SDHD_PSEAE
ID SDHD_PSEAE Reviewed; 448 AA.
AC Q9HYN9;
DT 19-SEP-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Probable D-serine dehydratase {ECO:0000255|HAMAP-Rule:MF_01030};
DE EC=4.3.1.18 {ECO:0000255|HAMAP-Rule:MF_01030};
DE AltName: Full=D-serine deaminase {ECO:0000255|HAMAP-Rule:MF_01030};
DE Short=DSD {ECO:0000255|HAMAP-Rule:MF_01030};
GN Name=dsdA {ECO:0000255|HAMAP-Rule:MF_01030}; OrderedLocusNames=PA3357;
OS Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM
OS 14847 / LMG 12228 / 1C / PRS 101 / PAO1).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=208964;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C /
RC PRS 101 / PAO1;
RX PubMed=10984043; DOI=10.1038/35023079;
RA Stover C.K., Pham X.-Q.T., Erwin A.L., Mizoguchi S.D., Warrener P.,
RA Hickey M.J., Brinkman F.S.L., Hufnagle W.O., Kowalik D.J., Lagrou M.,
RA Garber R.L., Goltry L., Tolentino E., Westbrock-Wadman S., Yuan Y.,
RA Brody L.L., Coulter S.N., Folger K.R., Kas A., Larbig K., Lim R.M.,
RA Smith K.A., Spencer D.H., Wong G.K.-S., Wu Z., Paulsen I.T., Reizer J.,
RA Saier M.H. Jr., Hancock R.E.W., Lory S., Olson M.V.;
RT "Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic
RT pathogen.";
RL Nature 406:959-964(2000).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=D-serine = NH4(+) + pyruvate; Xref=Rhea:RHEA:13977,
CC ChEBI:CHEBI:15361, ChEBI:CHEBI:28938, ChEBI:CHEBI:35247; EC=4.3.1.18;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01030};
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01030};
CC -!- SIMILARITY: Belongs to the serine/threonine dehydratase family. DsdA
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_01030}.
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DR EMBL; AE004091; AAG06745.1; -; Genomic_DNA.
DR PIR; D83225; D83225.
DR RefSeq; NP_252047.1; NC_002516.2.
DR RefSeq; WP_003113132.1; NZ_QZGE01000017.1.
DR AlphaFoldDB; Q9HYN9; -.
DR SMR; Q9HYN9; -.
DR STRING; 287.DR97_4570; -.
DR PaxDb; Q9HYN9; -.
DR PRIDE; Q9HYN9; -.
DR DNASU; 882524; -.
DR EnsemblBacteria; AAG06745; AAG06745; PA3357.
DR GeneID; 882524; -.
DR KEGG; pae:PA3357; -.
DR PATRIC; fig|208964.12.peg.3516; -.
DR PseudoCAP; PA3357; -.
DR HOGENOM; CLU_035707_0_0_6; -.
DR InParanoid; Q9HYN9; -.
DR OMA; ESDPNCF; -.
DR PhylomeDB; Q9HYN9; -.
DR BioCyc; PAER208964:G1FZ6-3421-MON; -.
DR BRENDA; 4.3.1.18; 5087.
DR Proteomes; UP000002438; Chromosome.
DR GO; GO:0008721; F:D-serine ammonia-lyase activity; IDA:PseudoCAP.
DR GO; GO:0016836; F:hydro-lyase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0036088; P:D-serine catabolic process; IBA:GO_Central.
DR GO; GO:0009097; P:isoleucine biosynthetic process; IBA:GO_Central.
DR Gene3D; 3.40.50.1100; -; 2.
DR HAMAP; MF_01030; D_Ser_dehydrat; 1.
DR InterPro; IPR011780; D_Ser_am_lyase.
DR InterPro; IPR001926; PLP-dep.
DR InterPro; IPR000634; Ser/Thr_deHydtase_PyrdxlP-BS.
DR InterPro; IPR036052; Trypto_synt_PLP_dependent.
DR PANTHER; PTHR48078:SF9; PTHR48078:SF9; 1.
DR Pfam; PF00291; PALP; 1.
DR SUPFAM; SSF53686; SSF53686; 1.
DR TIGRFAMs; TIGR02035; D_Ser_am_lyase; 1.
DR PROSITE; PS00165; DEHYDRATASE_SER_THR; 1.
PE 3: Inferred from homology;
KW Lyase; Pyridoxal phosphate; Reference proteome.
FT CHAIN 1..448
FT /note="Probable D-serine dehydratase"
FT /id="PRO_0000185618"
FT MOD_RES 119
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01030"
SQ SEQUENCE 448 AA; 48219 MW; CA32EFE786EDEB48 CRC64;
MILGTPKADW LAEFPRLADL IALRPSEWFN PAIAPSAEAL ADVGLGAADV ADASARLQRF
APLIARLFPE TAASGGIIES DLVEVATFHD ALRQHYAAEL PGRLWLKRDS HLPISGSIKA
RGGIYEVLAH AERLALEHGL VGLDDDYSRL AEADCRAFFA RHRIAVGSTG NLGLSIGIIG
AALGFQASVH MSADARQWKK DKLRAHGVTV VEYASDYSVA VEQGRREAAG DPYTHFVDDE
NSRDLFLGYA VAAERLRGQL DAAGIRVDSE HPLFVHLPCG VGGGPGGVAF GLKLAFGDAV
HCLFAEPTHS PCMFLGVYTG RHEQVSVQDF GIDNRTAADG LAVGRPSGFV GRAMQRLLDG
YYTVDDDELF RLLALLERSQ GIRLEPSALA GATGIARVTR EPQGYRERMG LTSARLANAT
HLVWATGGGM VPETEMRAYL ERGRSLLD