ID   SDO1_PYRAB              Reviewed;         236 AA.
AC   Q9V121; G8ZJ73;
DT   14-AUG-2001, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   25-MAY-2022, entry version 104.
DE   RecName: Full=Ribosome maturation protein SDO1 homolog;
GN   OrderedLocusNames=PYRAB06080; ORFNames=PAB0418;
OS   Pyrococcus abyssi (strain GE5 / Orsay).
OC   Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC   Pyrococcus.
OX   NCBI_TaxID=272844;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=GE5 / Orsay;
RX   PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA   Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA   Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA   Weissenbach J., Zivanovic Y., Forterre P.;
RT   "An integrated analysis of the genome of the hyperthermophilic archaeon
RT   Pyrococcus abyssi.";
RL   Mol. Microbiol. 47:1495-1512(2003).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=GE5 / Orsay;
RX   PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA   Gao J., Wang J.;
RT   "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT   Pyrococcus furiosus DSM 3638.";
RL   Curr. Microbiol. 64:118-129(2012).
CC   -!- SIMILARITY: Belongs to the SDO1/SBDS family. {ECO:0000305}.
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DR   EMBL; AJ248284; CAB49530.1; -; Genomic_DNA.
DR   EMBL; HE613800; CCE70000.1; -; Genomic_DNA.
DR   PIR; C75181; C75181.
DR   RefSeq; WP_010867732.1; NC_000868.1.
DR   AlphaFoldDB; Q9V121; -.
DR   SMR; Q9V121; -.
DR   STRING; 272844.PAB0418; -.
DR   EnsemblBacteria; CAB49530; CAB49530; PAB0418.
DR   GeneID; 1495513; -.
DR   KEGG; pab:PAB0418; -.
DR   PATRIC; fig|272844.11.peg.646; -.
DR   eggNOG; arCOG04187; Archaea.
DR   HOGENOM; CLU_043216_2_0_2; -.
DR   OMA; AVNPQMD; -.
DR   OrthoDB; 59861at2157; -.
DR   PhylomeDB; Q9V121; -.
DR   Proteomes; UP000000810; Chromosome.
DR   Proteomes; UP000009139; Chromosome.
DR   GO; GO:0042256; P:mature ribosome assembly; IEA:InterPro.
DR   Gene3D; 1.10.10.900; -; 1.
DR   Gene3D; 3.30.1250.10; -; 1.
DR   InterPro; IPR035647; EFG_III/V.
DR   InterPro; IPR018023; Ribosome_mat_SBDS_CS.
DR   InterPro; IPR036786; Ribosome_mat_SBDS_N_sf.
DR   InterPro; IPR018978; Ribosome_mat_Sdo1/SBDS_C.
DR   InterPro; IPR019783; Ribosome_mat_Sdo1/SBDS_N.
DR   InterPro; IPR002140; Sdo1/SBDS.
DR   InterPro; IPR039100; Sdo1/SBDS-like.
DR   InterPro; IPR037188; Sdo1/SBDS_central_sf.
DR   PANTHER; PTHR10927; PTHR10927; 1.
DR   Pfam; PF01172; SBDS; 1.
DR   Pfam; PF09377; SBDS_C; 1.
DR   SUPFAM; SSF109728; SSF109728; 1.
DR   SUPFAM; SSF54980; SSF54980; 1.
DR   SUPFAM; SSF89895; SSF89895; 1.
DR   TIGRFAMs; TIGR00291; RNA_SBDS; 1.
DR   PROSITE; PS01267; UPF0023; 1.
PE   3: Inferred from homology;
FT   CHAIN           1..236
FT                   /note="Ribosome maturation protein SDO1 homolog"
FT                   /id="PRO_0000123771"
SQ   SEQUENCE   236 AA;  27062 MW;  3B61AAE1F53FCB8F CRC64;
     MPISVDKAVI ARLKVHGETF EILVDPYLAR DFKEGKEVPI EEILATPYVF KDAHKGDKAS
     EKEMEKIFGT SDPYEVAKII LRKGEVQLTA QQRREMLEEK KRQIATIIHR HAVDPRTGYP
     HPVDRILRAM EEVGVRVDIF KDAEAQVQDV IKAIRRILPL RIEMKVIAVK IPSEYVGRAY
     GEVRKFGRIK KEEWASDGSW LFLIEIPGGV EEEFYEKLNA LTKGNAQTKL IERKGL