ID   SDO1_PYRHO              Reviewed;         236 AA.
AC   O59220;
DT   30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT   01-AUG-1998, sequence version 1.
DT   25-MAY-2022, entry version 113.
DE   RecName: Full=Ribosome maturation protein SDO1 homolog;
GN   OrderedLocusNames=PH1552;
OS   Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC
OS   100139 / OT-3).
OC   Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC   Pyrococcus.
OX   NCBI_TaxID=70601;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3;
RX   PubMed=9679194; DOI=10.1093/dnares/5.2.55;
RA   Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S.,
RA   Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K.,
RA   Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T., Tanaka T.,
RA   Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Yoshizawa T.,
RA   Nakamura Y., Robb F.T., Horikoshi K., Masuchi Y., Shizuya H., Kikuchi H.;
RT   "Complete sequence and gene organization of the genome of a hyper-
RT   thermophilic archaebacterium, Pyrococcus horikoshii OT3.";
RL   DNA Res. 5:55-76(1998).
CC   -!- SIMILARITY: Belongs to the SDO1/SBDS family. {ECO:0000305}.
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DR   EMBL; BA000001; BAA30664.1; -; Genomic_DNA.
DR   PIR; H71032; H71032.
DR   RefSeq; WP_010885631.1; NC_000961.1.
DR   AlphaFoldDB; O59220; -.
DR   SMR; O59220; -.
DR   STRING; 70601.3257981; -.
DR   EnsemblBacteria; BAA30664; BAA30664; BAA30664.
DR   GeneID; 1443871; -.
DR   KEGG; pho:PH1552; -.
DR   eggNOG; arCOG04187; Archaea.
DR   OMA; AVNPQMD; -.
DR   OrthoDB; 59861at2157; -.
DR   Proteomes; UP000000752; Chromosome.
DR   GO; GO:0042256; P:mature ribosome assembly; IEA:InterPro.
DR   Gene3D; 1.10.10.900; -; 1.
DR   Gene3D; 3.30.1250.10; -; 1.
DR   InterPro; IPR035647; EFG_III/V.
DR   InterPro; IPR018023; Ribosome_mat_SBDS_CS.
DR   InterPro; IPR036786; Ribosome_mat_SBDS_N_sf.
DR   InterPro; IPR018978; Ribosome_mat_Sdo1/SBDS_C.
DR   InterPro; IPR019783; Ribosome_mat_Sdo1/SBDS_N.
DR   InterPro; IPR002140; Sdo1/SBDS.
DR   InterPro; IPR039100; Sdo1/SBDS-like.
DR   InterPro; IPR037188; Sdo1/SBDS_central_sf.
DR   PANTHER; PTHR10927; PTHR10927; 1.
DR   Pfam; PF01172; SBDS; 1.
DR   Pfam; PF09377; SBDS_C; 1.
DR   SUPFAM; SSF109728; SSF109728; 1.
DR   SUPFAM; SSF54980; SSF54980; 1.
DR   SUPFAM; SSF89895; SSF89895; 1.
DR   TIGRFAMs; TIGR00291; RNA_SBDS; 1.
DR   PROSITE; PS01267; UPF0023; 1.
PE   3: Inferred from homology;
FT   CHAIN           1..236
FT                   /note="Ribosome maturation protein SDO1 homolog"
FT                   /id="PRO_0000123772"
SQ   SEQUENCE   236 AA;  26972 MW;  0ED96034B5BD6B90 CRC64;
     MPISVDKAVI ARLKIQGETF EILVDPYLAR DFKEGKNVPI EEILATPYVF KDAHKGDKAS
     EKEMEKIFGT SDPYEVAKII LKKGEVQLTA QQRREMLEEK KRQIATIIHK HAVDPRTGYP
     HPVDRILRAM EEVGVRVDIF KDAEAQVQDV IKALRRVLPL RIEMKVIAVK IPGEYVGRSY
     GEVRKFGRIK KEEWGSDGSW MFLIEIPGGV EEEFYEKLNA LTKGNAQTKL IERKGL