SE1_MAIZE
ID SE1_MAIZE Reviewed; 173 AA.
AC A0A1D6F7U7;
DT 25-MAY-2022, integrated into UniProtKB/Swiss-Prot.
DT 30-NOV-2016, sequence version 1.
DT 03-AUG-2022, entry version 26.
DE RecName: Full=Protein SUGARY ENHANCER 1 {ECO:0000303|PubMed:31548423};
GN Name=SE1 {ECO:0000303|PubMed:31548423};
GN ORFNames=ZEAMMB73_Zm00001d007657 {ECO:0000312|EMBL:ONM27298.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73;
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Missouri 17;
RX PubMed=30061735; DOI=10.1038/s41588-018-0182-0;
RA Sun S., Zhou Y., Chen J., Shi J., Zhao H., Zhao H., Song W., Zhang M.,
RA Cui Y., Dong X., Liu H., Ma X., Jiao Y., Wang B., Wei X., Stein J.C.,
RA Glaubitz J.C., Lu F., Yu G., Liang C., Fengler K., Li B., Rafalski A.,
RA Schnable P.S., Ware D.H., Buckler E.S., Lai J.;
RT "Extensive intraspecific gene order and gene structural variations between
RT Mo17 and other maize genomes.";
RL Nat. Genet. 50:1289-1295(2018).
RN [3]
RP FUNCTION.
RX PubMed=31548423; DOI=10.1073/pnas.1902747116;
RA Zhang X., Mogel K.J.H.V., Lor V.S., Hirsch C.N., De Vries B.,
RA Kaeppler H.F., Tracy W.F., Kaeppler S.M.;
RT "Maize sugary enhancer1 (se1) is a gene affecting endosperm starch
RT metabolism.";
RL Proc. Natl. Acad. Sci. U.S.A. 116:20776-20785(2019).
CC -!- FUNCTION: Involved in starch metabolism in endosperm (PubMed:31548423).
CC Acts as a modifier of SUGARY1 (SU1), an isoamylase starch-debranching
CC enzyme involved in amylopectin biosynthesis in endosperm
CC (PubMed:31548423). {ECO:0000269|PubMed:31548423}.
CC -!- SIMILARITY: Belongs to the fantastic four family. {ECO:0000305}.
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DR EMBL; CM007648; ONM27298.1; -; Genomic_DNA.
DR RefSeq; XP_008670885.1; XM_008672663.1.
DR AlphaFoldDB; A0A1D6F7U7; -.
DR STRING; 4577.AC217415.3_FGP004; -.
DR EnsemblPlants; Zm00001eb115450_T001; Zm00001eb115450_P001; Zm00001eb115450.
DR Gramene; Zm00001eb115450_T001; Zm00001eb115450_P001; Zm00001eb115450.
DR MaizeGDB; 9031395; -.
DR eggNOG; ENOG502R63B; Eukaryota.
DR OMA; NEHERRV; -.
DR Proteomes; UP000007305; Chromosome 2.
DR ExpressionAtlas; A0A1D6F7U7; baseline and differential.
DR InterPro; IPR021410; FAF.
DR PANTHER; PTHR33155; PTHR33155; 1.
DR Pfam; PF11250; FAF; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..173
FT /note="Protein SUGARY ENHANCER 1"
FT /id="PRO_0000455588"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 173 AA; 17427 MW; 69139945E096DCD5 CRC64;
MIRPAPWVGA GHRGRGGEAG ACTESLGSES GDVGCDAAEI DQFFPPAPAA GGPDDAGAEP
CIPDLAAAAA AGKRRRGGFP PPMPRASGPL FLRAERRGGR LILTEVRADE RERRVVFRAE
RDGGRLRLRF ANDGDGPEAA GGGGGAGGGG GELCQVAAGR RGVQVGAVMM GAI