SEBP3_ARATH
ID SEBP3_ARATH Reviewed; 480 AA.
AC Q9LK38;
DT 11-JAN-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 103.
DE RecName: Full=Selenium-binding protein 3;
GN Name=SBP3; OrderedLocusNames=At3g23800; ORFNames=MYM9.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [5]
RP TISSUE SPECIFICITY, AND INDUCTION BY CADMIUM.
RX PubMed=18354042; DOI=10.1104/pp.107.114033;
RA Dutilleul C., Jourdain A., Bourguignon J., Hugouvieux V.;
RT "The Arabidopsis putative selenium-binding protein family: expression study
RT and characterization of SBP1 as a potential new player in cadmium
RT detoxification processes.";
RL Plant Physiol. 147:239-251(2008).
CC -!- TISSUE SPECIFICITY: Expressed in young seedlings, mostly in roots.
CC {ECO:0000269|PubMed:18354042}.
CC -!- INDUCTION: Slightly induced in roots by cadmium.
CC {ECO:0000269|PubMed:18354042}.
CC -!- SIMILARITY: Belongs to the selenium-binding protein family.
CC {ECO:0000305}.
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DR EMBL; AP000377; BAB01856.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76815.1; -; Genomic_DNA.
DR EMBL; BT005102; AAO50635.1; -; mRNA.
DR EMBL; AK117618; BAC42274.1; -; mRNA.
DR RefSeq; NP_189022.1; NM_113284.3.
DR AlphaFoldDB; Q9LK38; -.
DR SMR; Q9LK38; -.
DR BioGRID; 7294; 1.
DR STRING; 3702.AT3G23800.1; -.
DR PaxDb; Q9LK38; -.
DR PRIDE; Q9LK38; -.
DR ProteomicsDB; 232780; -.
DR EnsemblPlants; AT3G23800.1; AT3G23800.1; AT3G23800.
DR GeneID; 821962; -.
DR Gramene; AT3G23800.1; AT3G23800.1; AT3G23800.
DR KEGG; ath:AT3G23800; -.
DR Araport; AT3G23800; -.
DR TAIR; locus:2095183; AT3G23800.
DR eggNOG; KOG0918; Eukaryota.
DR HOGENOM; CLU_032512_0_0_1; -.
DR OrthoDB; 483905at2759; -.
DR PhylomeDB; Q9LK38; -.
DR PRO; PR:Q9LK38; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LK38; baseline and differential.
DR Genevisible; Q9LK38; AT.
DR GO; GO:0008430; F:selenium binding; IEA:InterPro.
DR InterPro; IPR008826; Se-bd.
DR PANTHER; PTHR23300; PTHR23300; 1.
DR Pfam; PF05694; SBP56; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Selenium.
FT CHAIN 1..480
FT /note="Selenium-binding protein 3"
FT /id="PRO_0000403645"
SQ SEQUENCE 480 AA; 53359 MW; 4508E02A513FA56B CRC64;
MEAAMNNHDG DCCKSGPGYA TPLLAMSGPR EKLIYVAAIY TGTGQAKPDY LATVDVEPSS
STYSSVIHRL PMPYLEDELH HSGWNSCSSC YGDSSCERRY LILPSLLSGR IYVIDTKTNP
REPSLHKFVD PAEVLEKTGL AYPHQPHCLA SGDVLVSCLG DEDGNAEGSG FLLLDSEFNI
KGRWEKDGNS PLYGYDFWYQ PRHKTMISTS WGAPAAFTKG FDLKDVSDGL YGKHLHVYSW
PQGELKQILD LGDTGLLPLE VRFLHEPDKA TGFAGCALSS TLVRFFKNDD ETWSHEVAIS
VEPLKVENWI LPEMPGLITD FLISLDDRFL YCSNWLHGDI RQYNIEDPKT PVLTGQIHVG
GLVQKGSLVL ALGEEGKAFQ FDVPKIKGQR LRGGPQMFQL SLDGKRLYVT NSLFSVWDRQ
FYPELVEKGS HMLQIDVDTD KGGLSINPNF FVDFGTEPDG PSLAHEMRYP GGDCTSDIWV