SEC24_COCIM
ID SEC24_COCIM Reviewed; 932 AA.
AC Q1E6U9; J3KK44;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 2.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Protein transport protein SEC24;
GN Name=SEC24; ORFNames=CIMG_01714;
OS Coccidioides immitis (strain RS) (Valley fever fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=246410;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=RS;
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
CC -!- FUNCTION: Component of the coat protein complex II (COPII) which
CC promotes the formation of transport vesicles from the endoplasmic
CC reticulum (ER). The coat has two main functions, the physical
CC deformation of the endoplasmic reticulum membrane into vesicles and the
CC selection of cargo molecules (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: The COPII coat is composed of at least 5 proteins: the
CC SEC23/24 complex, the SEC13/31 complex, and the protein SAR1. Golgi
CC apparatus membrane; Peripheral membrane protein; Cytoplasmic side.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Cytoplasmic vesicle,
CC COPII-coated vesicle membrane {ECO:0000250}; Peripheral membrane
CC protein {ECO:0000250}; Cytoplasmic side {ECO:0000250}. Endoplasmic
CC reticulum membrane {ECO:0000250}; Peripheral membrane protein
CC {ECO:0000250}; Cytoplasmic side {ECO:0000250}. Golgi apparatus membrane
CC {ECO:0000250}; Peripheral membrane protein {ECO:0000250}; Cytoplasmic
CC side {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
CC {ECO:0000305}.
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DR EMBL; GG704911; EAS36360.3; -; Genomic_DNA.
DR RefSeq; XP_001247943.2; XM_001247942.2.
DR AlphaFoldDB; Q1E6U9; -.
DR SMR; Q1E6U9; -.
DR STRING; 246410.Q1E6U9; -.
DR EnsemblFungi; EAS36360; EAS36360; CIMG_01714.
DR GeneID; 4566953; -.
DR KEGG; cim:CIMG_01714; -.
DR VEuPathDB; FungiDB:CIMG_01714; -.
DR InParanoid; Q1E6U9; -.
DR OMA; TFPRDQS; -.
DR OrthoDB; 330236at2759; -.
DR Proteomes; UP000001261; Unassembled WGS sequence.
DR GO; GO:0030127; C:COPII vesicle coat; IEA:InterPro.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IEA:InterPro.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR CDD; cd01479; Sec24-like; 1.
DR Gene3D; 3.40.20.10; -; 1.
DR Gene3D; 3.40.50.410; -; 1.
DR InterPro; IPR029006; ADF-H/Gelsolin-like_dom_sf.
DR InterPro; IPR007123; Gelsolin-like_dom.
DR InterPro; IPR036180; Gelsolin-like_dom_sf.
DR InterPro; IPR006900; Sec23/24_helical_dom.
DR InterPro; IPR036175; Sec23/24_helical_dom_sf.
DR InterPro; IPR006896; Sec23/24_trunk_dom.
DR InterPro; IPR012990; Sec23_24_beta_S.
DR InterPro; IPR041742; Sec24-like_trunk_dom.
DR InterPro; IPR036465; vWFA_dom_sf.
DR InterPro; IPR006895; Znf_Sec23_Sec24.
DR InterPro; IPR036174; Znf_Sec23_Sec24_sf.
DR Pfam; PF00626; Gelsolin; 1.
DR Pfam; PF08033; Sec23_BS; 1.
DR Pfam; PF04815; Sec23_helical; 1.
DR Pfam; PF04811; Sec23_trunk; 1.
DR Pfam; PF04810; zf-Sec23_Sec24; 1.
DR SUPFAM; SSF53300; SSF53300; 1.
DR SUPFAM; SSF81811; SSF81811; 1.
DR SUPFAM; SSF82754; SSF82754; 1.
DR SUPFAM; SSF82919; SSF82919; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Cytoplasmic vesicle; Endoplasmic reticulum; ER-Golgi transport;
KW Golgi apparatus; Membrane; Metal-binding; Protein transport;
KW Reference proteome; Transport; Zinc.
FT CHAIN 1..932
FT /note="Protein transport protein SEC24"
FT /id="PRO_0000295485"
FT REGION 1..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 81..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 255..280
FT /note="Zinc finger-like"
FT COMPBIAS 29..43
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 88..105
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 255
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 258
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 277
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 280
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
SQ SEQUENCE 932 AA; 101401 MW; A9FDF28382136155 CRC64;
MAAPQEGYPP PHSDGQQGYG QPYGAPPAEA DQPVAPPPAG APATGGPTHG GRKKRAYAGQ
AFEFGSGANA ALGGQLPGGG TYGGYPAPPQ PQGYPPVPYP GQPAQPAPET YAAGEQLGAG
GYQPPGPGYP AADVSQITQQ MGQMSMGGQM PGRAPGATSL NQLYPTDLLA QSFNVAELDF
PPPPVILPPN ASVTPSPTAN CSAKFVRSTL NAVPTTNSLL KKSRLPFALV IQPFTSLHDS
EDPVPIVSDQ IISRCRRCRS YINPFVTFLD HGHRWRCNMC NLTNDVPQGF DWDATAQQAL
DRWQRPELNH AVVEFVAPQE YMVRPPQPLV YLFLIDVSYS SVTTGLLATA ARCIKESLDR
IPNTDRRTRL GFIAVDSSLH YFTIPRDGSE SSDPSMLVVS DLDEPFLPIP GDLLVTLTEC
RENIEIFLDK LQEMFQNTQN GGSAMGSALR AGHKLIGPVG GKLTVLTASL PNIGYGSLEM
REDKKVLGTS KESSLLQTGN SFYKSFAVEC SKQQISVDMF LFSSQYQDVA SLSNLPRYTG
GQTYFYPGWN AARSEDAIKF AKEFSDYLSS EIGLEAVLRV RATTGLRMST FYGNFFNRSS
DLCAFPAFPR DQAYVVEVAI DETVTKSVVC LQTAVLHTTC NGERRIRVLT LALPTTQSLA
DVYASADQTA IATYFSHKAV ERTLGSGLEQ ARDALQAKII ELLSTYRKEL AGGSVTGGGL
QFPSNLRGLP LLFLALIKNL GLRKSAQIPT DMRSAALCLL STLPLPLLIQ YIYPKMYSLH
DMPDDAGVPD PATGEIVLPP LCNLTSERLV PYGLYLIDDG QTQFLWVGRD AVPQLVQDVF
GFPDKSQLRV GKQFLPELDN DFNERVRAVI QKSRDFRSRG VGSIIVPQLY VVKEDGEPGL
RLWAQSMLVE DRADQGVSLQ QWMSLLREKV IQ