SEC24_PICPA
ID SEC24_PICPA Reviewed; 960 AA.
AC Q0PVD8;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 57.
DE RecName: Full=Protein transport protein SEC24;
GN Name=SEC24;
OS Komagataella pastoris (Yeast) (Pichia pastoris).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Phaffomycetaceae; Komagataella.
OX NCBI_TaxID=4922;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=16962585; DOI=10.1016/j.febslet.2006.08.058;
RA Esaki M., Liu Y., Glick B.S.;
RT "The budding yeast Pichia pastoris has a novel Sec23p homolog.";
RL FEBS Lett. 580:5215-5221(2006).
CC -!- FUNCTION: Component of the coat protein complex II (COPII) which
CC promotes the formation of transport vesicles from the endoplasmic
CC reticulum (ER). The coat has two main functions, the physical
CC deformation of the endoplasmic reticulum membrane into vesicles and the
CC selection of cargo molecules (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: The COPII coat is composed of at least 5 proteins: the
CC SEC23/24 complex, the SEC13/31 complex, and the protein SAR1. Golgi
CC apparatus membrane; Peripheral membrane protein; Cytoplasmic side.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Cytoplasmic vesicle,
CC COPII-coated vesicle membrane {ECO:0000250}; Peripheral membrane
CC protein {ECO:0000250}; Cytoplasmic side {ECO:0000250}. Endoplasmic
CC reticulum membrane {ECO:0000250}; Peripheral membrane protein
CC {ECO:0000250}; Cytoplasmic side {ECO:0000250}. Golgi apparatus membrane
CC {ECO:0000250}; Peripheral membrane protein {ECO:0000250}; Cytoplasmic
CC side {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
CC {ECO:0000305}.
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DR EMBL; DQ683203; ABG81279.1; -; Genomic_DNA.
DR AlphaFoldDB; Q0PVD8; -.
DR SMR; Q0PVD8; -.
DR IntAct; Q0PVD8; 2.
DR MINT; Q0PVD8; -.
DR GO; GO:0030127; C:COPII vesicle coat; IEA:InterPro.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IEA:InterPro.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR CDD; cd01479; Sec24-like; 1.
DR Gene3D; 3.40.20.10; -; 1.
DR Gene3D; 3.40.50.410; -; 1.
DR InterPro; IPR029006; ADF-H/Gelsolin-like_dom_sf.
DR InterPro; IPR036180; Gelsolin-like_dom_sf.
DR InterPro; IPR006900; Sec23/24_helical_dom.
DR InterPro; IPR036175; Sec23/24_helical_dom_sf.
DR InterPro; IPR006896; Sec23/24_trunk_dom.
DR InterPro; IPR012990; Sec23_24_beta_S.
DR InterPro; IPR041742; Sec24-like_trunk_dom.
DR InterPro; IPR036465; vWFA_dom_sf.
DR InterPro; IPR006895; Znf_Sec23_Sec24.
DR InterPro; IPR036174; Znf_Sec23_Sec24_sf.
DR Pfam; PF08033; Sec23_BS; 1.
DR Pfam; PF04815; Sec23_helical; 1.
DR Pfam; PF04811; Sec23_trunk; 1.
DR Pfam; PF04810; zf-Sec23_Sec24; 1.
DR SUPFAM; SSF53300; SSF53300; 1.
DR SUPFAM; SSF81811; SSF81811; 1.
DR SUPFAM; SSF82754; SSF82754; 1.
DR SUPFAM; SSF82919; SSF82919; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Cytoplasmic vesicle; Endoplasmic reticulum; ER-Golgi transport;
KW Golgi apparatus; Membrane; Metal-binding; Protein transport; Transport;
KW Zinc.
FT CHAIN 1..960
FT /note="Protein transport protein SEC24"
FT /id="PRO_0000295495"
FT REGION 1..110
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 254..279
FT /note="Zinc finger-like"
FT COMPBIAS 75..104
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 254
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 257
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 276
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 279
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
SQ SEQUENCE 960 AA; 106081 MW; 0B47A40FC5498D13 CRC64;
MSGKRRAYPS MQYPATEPVA TGGSFGYGQQ PGAQAYGQQF TPGAGIAGQQ LPGATQPNLN
GQGAPYGAPG GDQLAQGMSS LNIQPNQQPQ PVHQFPSQQQ GYINPGAGLG VPPTQAAGPY
GVPAAVAPQQ QSAQLGYAGP PYGNTYDQQQ PQQAAFPFNQ LYTADLLKEL PPPISDLELP
PPPIVLPQGA SLTGKPESNA SPEYFRCTLN VIPNNNSLLK KSKLPLAVVV NPYQCLRDED
EPVPVVEDTL ISRCRRCRSY INPLITFVDR NTKWRCNLCN LTNDVPSGFD FDKDTQQRVD
RMARVELNYS VVEFVAPKEY MVRLPQPLVY LFVLDVSTHA IQNGYLATVA RTILDSLDQI
PNKDGRARVG FIGVDSSLHF FTIPQDSEDE NDAQETSMLV VSDLDDVIVP AAENLLAPLQ
QSRQNIENLL NNFHSYFENN VNPNFALGPA LKAGHRLINN IGGKMIVFTS TLPNKGIGAL
SIRDEEAHSG KAKESSALLS PNDSFYKSFA VECNKSQVTV DMFLASSSYQ DVATLSNLPR
YTAGQTHFYP AWTAAREEDI TKLSKEISNH LSMNINLEAV LRVRGSAGLR MNAFYGNFFN
RSSDLCSFPT FPRDQSYLIE ISIDEHITKP LAAFQAAVLH TTSFGERRIR VMTLEVPIGK
ELNQIYASAD QLAITNYFTH KAVEKALSSS LIDAREYLNR SLLDIFQVFK KELVAGNLGS
SSPLQLCNNL KMLPLLLHSL TKYIAFRPGK VPSDHRAYAL NLLASSPIQR LIKFIYPTIY
SLHDMADECG LPEELEETYV NEAGEEVTEP IDGDIVLPEP INDTSTLLAP YGLYLIDSGT
DLFLYVGGES VPQLLLDVFG VDNPGYIKYG KSELPELNNE FNERLRNVIN RVREGKDRIT
YQNLQIVIGQ SKQRTGVPDR IQEDLTPLRL WCFSHLVEDR VGGGTAYREY LNQIREKLSS