BGAL3_ORYSJ
ID BGAL3_ORYSJ Reviewed; 851 AA.
AC Q5N8X6; Q8RYX9;
DT 10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Beta-galactosidase 3;
DE Short=Lactase 3;
DE EC=3.2.1.23;
DE Flags: Precursor;
GN OrderedLocusNames=Os01g0875500, LOC_Os01g65460;
GN ORFNames=P0648C09.21, P0698A10.24;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of terminal non-reducing beta-D-galactose residues
CC in beta-D-galactosides.; EC=3.2.1.23;
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, apoplast
CC {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 35 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB86232.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP003297; BAD82087.1; -; Genomic_DNA.
DR EMBL; AP003922; BAB86232.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008207; BAF06878.1; -; Genomic_DNA.
DR EMBL; AP014957; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; Q5N8X6; -.
DR SMR; Q5N8X6; -.
DR STRING; 4530.OS01T0875500-01; -.
DR CAZy; GH35; Glycoside Hydrolase Family 35.
DR PaxDb; Q5N8X6; -.
DR PRIDE; Q5N8X6; -.
DR eggNOG; KOG0496; Eukaryota.
DR HOGENOM; CLU_007853_4_0_1; -.
DR InParanoid; Q5N8X6; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR Genevisible; Q5N8X6; OS.
DR GO; GO:0048046; C:apoplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005773; C:vacuole; IBA:GO_Central.
DR GO; GO:0004565; F:beta-galactosidase activity; IBA:GO_Central.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 2.60.120.740; -; 1.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR041392; GHD.
DR InterPro; IPR031330; Gly_Hdrlase_35_cat.
DR InterPro; IPR001944; Glycoside_Hdrlase_35.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR000922; Lectin_gal-bd_dom.
DR InterPro; IPR043159; Lectin_gal-bd_sf.
DR PANTHER; PTHR23421; PTHR23421; 1.
DR Pfam; PF02140; Gal_Lectin; 1.
DR Pfam; PF17834; GHD; 1.
DR Pfam; PF01301; Glyco_hydro_35; 1.
DR PRINTS; PR00742; GLHYDRLASE35.
DR SUPFAM; SSF49785; SSF49785; 2.
DR SUPFAM; SSF51445; SSF51445; 1.
DR PROSITE; PS50228; SUEL_LECTIN; 1.
PE 3: Inferred from homology;
KW Apoplast; Glycoprotein; Glycosidase; Hydrolase; Reference proteome;
KW Secreted; Signal.
FT SIGNAL 1..29
FT /evidence="ECO:0000255"
FT CHAIN 30..851
FT /note="Beta-galactosidase 3"
FT /id="PRO_0000294154"
FT DOMAIN 765..851
FT /note="SUEL-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00260"
FT ACT_SITE 194
FT /note="Proton donor"
FT /evidence="ECO:0000255"
FT ACT_SITE 263
FT /note="Nucleophile"
FT /evidence="ECO:0000255"
FT CARBOHYD 35
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 361
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 475
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 528
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 533
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 851 AA; 94710 MW; D2E70688E717B2FD CRC64;
MAGASSYFSL RRLLLLLLPL VPLLGATTAA AAGANSSVTY DHRSLIISGR RRLLISTSIH
YPRSVPEMWP KLVAEAKDGG ADCVETYVFW NGHEPAQGQY YFEERFDLVR FAKIVKDAGL
YMILRIGPFV AAEWTFGGVP VWLHYAPGTV FRTNNEPFKS HMKRFTTYIV DMMKKEQFFA
SQGGHIILAQ VENEYGDMEQ AYGAGAKPYA MWAASMALAQ NTGVPWIMCQ QYDAPDPVIN
TCNSFYCDQF KPNSPTKPKF WTENWPGWFQ TFGESNPHRP PEDVAFSVAR FFGKGGSLQN
YYVYHGGTNF GRTTGGPFIT TSYDYDAPID EYGLRRLPKW AHLRDLHKSI KLGEHTLLYG
NSSFVSLGPQ QEADVYTDQS GGCVAFLSNV DSEKDKVVTF QSRSYDLPAW SVSILPDCKN
VAFNTAKVRS QTLMMDMVPA NLESSKVDGW SIFREKYGIW GNIDLVRNGF VDHINTTKDS
TDYLWYTTSF DVDGSHLAGG NHVLHIESKG HAVQAFLNNE LIGSAYGNGS KSNFSVEMPV
NLRAGKNKLS LLSMTVGLQN GGPMYEWAGA GITSVKISGM ENRIIDLSSN KWEYKIGLEG
EYYSLFKADK GKDIRWMPQS EPPKNQPMTW YKVNVDVPQG DDPVGLDMQS MGKGLAWLNG
NAIGRYWPRI SPVSDRCTSS CDYRGTFSPN KCRRGCGQPT QRWYHVPRSW FHPSGNTLVI
FEEKGGDPTK ITFSRRTVAS VCSFVSEHYP SIDLESWDRN TQNDGRDAAK VQLSCPKGKS
ISSVKFVSFG NPSGTCRSYQ QGSCHHPNSI SVVEKACLNM NGCTVSLSDE GFGEDLCPGV
TKTLAIEADC S