SELM_DANRE
ID SELM_DANRE Reviewed; 151 AA.
AC Q802G7; Q5XJC8;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 26-FEB-2008, sequence version 2.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Selenoprotein M {ECO:0000303|PubMed:12915322};
DE Short=SePM {ECO:0000303|PubMed:12915322};
DE Short=SelM;
DE Flags: Precursor;
GN Name=Selenom {ECO:0000250|UniProtKB:Q8WWX9};
GN Synonyms=selm, sepm {ECO:0000303|PubMed:12915322};
GN ORFNames=zgc:103431 {ECO:0000312|EMBL:AAH83376.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RC TISSUE=Embryo;
RX PubMed=12915322; DOI=10.1016/s1567-133x(03)00054-1;
RA Thisse C., Degrave A., Kryukov G.V., Gladyshev V.N., Obrecht-Pflumio S.,
RA Krol A., Thisse B., Lescure A.;
RT "Spatial and temporal expression patterns of selenoprotein genes during
RT embryogenesis in zebrafish.";
RL Gene Expr. Patterns 3:525-532(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Heart;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May function as a thiol-disulfide oxidoreductase that
CC participates in disulfide bond formation. {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: During early embryogenesis, abundantly expressed
CC within the notochord and anterior somites. At later stages, accumulates
CC within the axial fin fold, dorsal spinal cord neurons, then in lateral
CC line neuromasts. {ECO:0000269|PubMed:12915322}.
CC -!- SIMILARITY: Belongs to the selenoprotein M/F family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH83376.1; Type=Erroneous termination; Note=Truncated C-terminus.; Evidence={ECO:0000305};
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DR EMBL; AY216584; AAO86698.1; -; mRNA.
DR EMBL; BC083376; AAH83376.1; ALT_SEQ; mRNA.
DR STRING; 7955.ENSDARP00000119889; -.
DR PaxDb; Q802G7; -.
DR ZFIN; ZDB-GENE-030410-4; selenom.
DR eggNOG; ENOG502S29K; Eukaryota.
DR InParanoid; Q802G7; -.
DR PhylomeDB; Q802G7; -.
DR PRO; PR:Q802G7; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0005788; C:endoplasmic reticulum lumen; IBA:GO_Central.
DR GO; GO:0016491; F:oxidoreductase activity; IBA:GO_Central.
DR Gene3D; 3.40.30.50; -; 1.
DR InterPro; IPR038219; Sep15/SelM_sf.
DR InterPro; IPR039992; Sep15_SelM.
DR InterPro; IPR014912; Sep15_SelM_dom.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR PANTHER; PTHR13077; PTHR13077; 1.
DR Pfam; PF08806; Sep15_SelM; 1.
DR SUPFAM; SSF52833; SSF52833; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Selenocysteine; Signal.
FT SIGNAL 1..16
FT /evidence="ECO:0000255"
FT CHAIN 17..151
FT /note="Selenoprotein M"
FT /id="PRO_0000318607"
FT REGION 109..151
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 109..124
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 35
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 38
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT NON_STD 38
FT /note="Selenocysteine"
FT /evidence="ECO:0000250"
FT CROSSLNK 35..38
FT /note="Cysteinyl-selenocysteine (Cys-Sec)"
FT /evidence="ECO:0000255"
FT CONFLICT 88
FT /note="S -> F (in Ref. 2; AAH83376)"
FT /evidence="ECO:0000305"
FT CONFLICT 108
FT /note="G -> D (in Ref. 2; AAH83376)"
FT /evidence="ECO:0000305"
FT CONFLICT 130..135
FT /note="SRLSSA -> GRQSST (in Ref. 2; AAH83376)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 151 AA; 17172 MW; 60B4B22DAA6E6866 CRC64;
MWPLIFTALL PSVILTYEVN IEKLSGLARA RVETCGGUQL NRMREVKAFV TQDIPLYHNL
VMKHIPGADP ELVLLNHYYE ELDRIPLSEM TRAEINKLLA ELGFYKKGHP EDQVPEEFRF
SPAKDSPFES RLSSAAAPET TEPSDSQHTD L