SELN_XENTR
ID SELN_XENTR Reviewed; 562 AA.
AC Q01H84; Q6P3Q2;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 26-FEB-2008, sequence version 2.
DT 03-AUG-2022, entry version 61.
DE RecName: Full=Selenoprotein N {ECO:0000250|UniProtKB:Q9NZV5};
DE Short=SelN {ECO:0000250|UniProtKB:Q9NZV5};
GN Name=selenon; Synonyms=sepn1;
GN ORFNames=TEgg073a06.1 {ECO:0000312|EMBL:CAL50709.1};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Egg;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Plays an important role in cell protection against oxidative
CC stress and in the regulation of redox-related calcium homeostasis.
CC Regulates the calcium level of the ER by protecting the calcium pump
CC ATP2A2 against the oxidoreductase ERO1A-mediated oxidative damage. Acts
CC as a modulator of ryanodine receptor (RyR) activity. Plays an important
CC role in muscle development and differentiation during early
CC development. {ECO:0000250|UniProtKB:Q3Y4E2,
CC ECO:0000250|UniProtKB:Q9NZV5}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC {ECO:0000250|UniProtKB:Q9NZV5}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH63905.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
CC Sequence=AAH63905.1; Type=Erroneous termination; Note=Truncated C-terminus.; Evidence={ECO:0000305};
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DR EMBL; CR855533; CAL50709.1; -; mRNA.
DR EMBL; BC063905; AAH63905.1; ALT_SEQ; mRNA.
DR RefSeq; NP_001070901.1; NM_001077433.2.
DR STRING; 8364.ENSXETP00000023401; -.
DR PaxDb; Q01H84; -.
DR Ensembl; ENSXETT00000023401; ENSXETP00000023401; ENSXETG00000010686.
DR GeneID; 394859; -.
DR KEGG; xtr:394859; -.
DR CTD; 57190; -.
DR Xenbase; XB-GENE-6456840; selenon.
DR eggNOG; ENOG502QREI; Eukaryota.
DR InParanoid; Q01H84; -.
DR OrthoDB; 817333at2759; -.
DR Proteomes; UP000008143; Chromosome 6.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000010686; Expressed in neurula embryo and 13 other tissues.
DR ExpressionAtlas; Q01H84; baseline.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR GO; GO:0055074; P:calcium ion homeostasis; IBA:GO_Central.
DR GO; GO:0048741; P:skeletal muscle fiber development; IBA:GO_Central.
PE 2: Evidence at transcript level;
KW Endoplasmic reticulum; Glycoprotein; Membrane; Oxidoreductase;
KW Reference proteome; Selenocysteine; Transmembrane; Transmembrane helix.
FT CHAIN 1..562
FT /note="Selenoprotein N"
FT /id="PRO_0000318632"
FT TRANSMEM 40..60
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_STD 436
FT /note="Selenocysteine"
FT CARBOHYD 163
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 310
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 457
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 503
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CONFLICT 44
FT /note="L -> S (in Ref. 2; AAH63905)"
FT /evidence="ECO:0000305"
FT CONFLICT 104
FT /note="S -> A (in Ref. 2; AAH63905)"
FT /evidence="ECO:0000305"
FT CONFLICT 113
FT /note="T -> A (in Ref. 2; AAH63905)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 562 AA; 64071 MW; A0B6FA0C533C00DC CRC64;
MSADLRKRKK DTTADNDAPQ EAQAEEENKK EKPSSCRYRF LWKLLLGLLL IALLFGIKIH
RDNELVRQQE AALRTLGAEG LFLFSSLDTD NDMHISPEEF KPISEKLTGI STTSDYEEEE
LLDPNGETLS VASRFQPLLM ETMTKSKDGF LGITHSALSG LRNWTTPVVP NNVFYAGQFK
AFLPPKNKLE VGNPWWIIPS ELSIFTGYLP NNRIYPPPPK GKEVIIHKLL SMFHPRPFIK
TRFAPQGSVA CIRAISDFYY DIVFRIHAEF QLNEPPNFPF WFSPGQFTGN IVISKDAAHV
RHFKLFVPNN RTLNVDMEWL YGASESSNME VDIGYLPQME IESLGPSIPS TIYDENGNIM
ESRNAEGEAI EFVFEDINWQ SEMTFEEAAR KLEVTMYPFK RVSYYPFPEA FDRALAEKKL
VHSVLLWGAL DDQSCUGSGR TLRETVLESL PVLALLNESF ISTWSLVKEL EELQSNKDSY
ATFASLHLEK YNFPVEMMIC LPNGTVVHHI NANYFLDITS LKPDEVETNL FSFSDGVEDL
STVTYIKFLK EGLEKAKPFL HS