SEOC_ARATH
ID SEOC_ARATH Reviewed; 664 AA.
AC Q9FXE2;
DT 29-APR-2015, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2015, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Protein SIEVE ELEMENT OCCLUSION C {ECO:0000303|PubMed:20932300};
DE Short=AtSEOc {ECO:0000303|PubMed:20932300};
GN Name=SEOC {ECO:0000303|PubMed:20932300};
GN OrderedLocusNames=At1g67790 {ECO:0000312|Araport:AT1G67790};
GN ORFNames=F12A21.8 {ECO:0000312|EMBL:AAG28888.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=20932300; DOI=10.1186/1471-2229-10-219;
RA Ruping B., Ernst A.M., Jekat S.B., Nordzieke S., Reineke A.R., Muller B.,
RA Bornberg-Bauer E., Prufer D., Noll G.A.;
RT "Molecular and phylogenetic characterization of the sieve element occlusion
RT gene family in Fabaceae and non-Fabaceae plants.";
RL BMC Plant Biol. 10:219-219(2010).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG28888.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC008113; AAG28888.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE34696.2; -; Genomic_DNA.
DR RefSeq; NP_001319338.1; NM_001334324.1.
DR AlphaFoldDB; Q9FXE2; -.
DR SMR; Q9FXE2; -.
DR PaxDb; Q9FXE2; -.
DR PRIDE; Q9FXE2; -.
DR ProteomicsDB; 232674; -.
DR EnsemblPlants; AT1G67790.1; AT1G67790.1; AT1G67790.
DR GeneID; 843105; -.
DR Gramene; AT1G67790.1; AT1G67790.1; AT1G67790.
DR KEGG; ath:AT1G67790; -.
DR Araport; AT1G67790; -.
DR TAIR; locus:2008590; AT1G67790.
DR eggNOG; ENOG502QQNR; Eukaryota.
DR HOGENOM; CLU_025476_0_0_1; -.
DR InParanoid; Q9FXE2; -.
DR OMA; GNYRWDA; -.
DR OrthoDB; 405304at2759; -.
DR PRO; PR:Q9FXE2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9FXE2; differential.
DR Genevisible; Q9FXE2; AT.
DR GO; GO:0010088; P:phloem development; IEA:InterPro.
DR InterPro; IPR027944; SEO_C.
DR InterPro; IPR027942; SEO_N.
DR InterPro; IPR039299; SEOA.
DR PANTHER; PTHR33232; PTHR33232; 1.
DR Pfam; PF14577; SEO_C; 1.
DR Pfam; PF14576; SEO_N; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..664
FT /note="Protein SIEVE ELEMENT OCCLUSION C"
FT /id="PRO_0000432875"
SQ SEQUENCE 664 AA; 77122 MW; C52D89DC01453415 CRC64;
MNFRRDISAL NEDIIVEQLL RSHDPDGRWL DSEMLLQEVE TILSFVLQND VSRPLLTENC
ITTIEVFDSK ETLPYAIFRI SVQMLCPCTG ENEIRKRTMV LFDLLKEYRW DAKAVLVLGV
LAATYGGLLL PVHLAICDPV AASIAKLNQL PIERTKFRPW LESLNLLIKA MVDVTKCIIK
FEKIPFKQAK LDNNILGETL SNIYLTTYRV VKSALTCMQQ IPYFKQTQQA KKSRKTAAEL
SIESRRAAGE LSSLGYQLLN IHTRLNKQVE DCSTQIEEEI NQRLRNINIE THQDNQDVLH
LLFSLQDDLP LQQYSRQISI TEVQDKVTLL LLSKPPVEPL FFLLQQLYDH PSNTNTEQNY
EIIWVPIPSS QKWTDEEKEI FDFYSNSLPW ISVRQPWLMS STILNFFKQE WHYKDNEAML
VVIDSNGRFV NMNAMDMVLI WGVKAYPFSV SREDELWKEH GWSINLLLDG IHPTFEGREI
CIFGSENLDW IDEFVSLARK IQNLGFQLEL IYLSNQRRDE RAMEESSILF SPTLQQLFWL
RLESIERSKL KRIVIEPSKP DRVFEEVRNL LDFDYGKHRG WGIIGNGSTA ETVDGEKMTE
RMRKIVRWGE YAKGLGFTEA IEIAAEKPCE LSHTAVVPFE EALTMKVVTC EKCKWPMKRF
VAYQ