SEP15_RAT
ID SEP15_RAT Reviewed; 162 AA.
AC Q923V8;
DT 31-JAN-2002, integrated into UniProtKB/Swiss-Prot.
DT 26-FEB-2008, sequence version 3.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Selenoprotein F {ECO:0000250|UniProtKB:O60613};
DE AltName: Full=15 kDa selenoprotein {ECO:0000303|PubMed:11278576};
DE Flags: Precursor;
GN Name=Selenof {ECO:0000250|UniProtKB:O60613};
GN Synonyms=Sep15 {ECO:0000312|RGD:621291};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Roethlein D., Kyriakopoulos A., Behne D.;
RT "A 15 kDa-selenoprotein in several tissues of the rat.";
RL Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Pituitary;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [3]
RP FUNCTION, INTERACTION WITH UGGT1, AND SUBCELLULAR LOCATION.
RX PubMed=11278576; DOI=10.1074/jbc.m009861200;
RA Korotkov K.V., Kumaraswamy E., Zhou Y., Hatfield D.L., Gladyshev V.N.;
RT "Association between the 15-kDa selenoprotein and UDP-glucose:glycoprotein
RT glucosyltransferase in the endoplasmic reticulum of mammalian cells.";
RL J. Biol. Chem. 276:15330-15336(2001).
RN [4]
RP FUNCTION, AND TISSUE SPECIFICITY.
RX PubMed=15659830; DOI=10.1196/annals.1329.057;
RA Kyriakopoulos A., Bukalis K., Roethlein D., Hoppe B., Graebert A.,
RA Behne D.;
RT "Prevention against oxidative stress of eukaryotic cell membranes by
RT selenium compounds of the rat.";
RL Ann. N. Y. Acad. Sci. 1030:458-461(2004).
CC -!- FUNCTION: May be involved in redox reactions associated with the
CC formation of disulfide bonds (PubMed:15659830). May contribute to the
CC quality control of protein folding in the endoplasmic reticulum
CC (PubMed:11278576). May regulate protein folding by enhancing the
CC catalytic activity of UGGT1/UGCGL1 and UGGT2/UGCGL2 (By similarity).
CC {ECO:0000250|UniProtKB:O60613, ECO:0000269|PubMed:11278576,
CC ECO:0000269|PubMed:15659830}.
CC -!- SUBUNIT: Forms a tight complex with UGGT1/UGCGL1 (PubMed:11278576).
CC Interacts with UGGT2/UGCGL2 (By similarity). Interacts with RDH11 (By
CC similarity). {ECO:0000250|UniProtKB:O60613,
CC ECO:0000269|PubMed:11278576}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum lumen
CC {ECO:0000269|PubMed:11278576}. Note=The association with UGGT1/UGCGL1
CC is essential for its retention in the endoplasmic reticulum.
CC -!- TISSUE SPECIFICITY: Highest levels in prostate, lower levels in brain,
CC lung, thyroid gland, and large intestine.
CC {ECO:0000269|PubMed:15659830}.
CC -!- SIMILARITY: Belongs to the selenoprotein M/F family. {ECO:0000305}.
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DR EMBL; AF390544; AAK73100.1; -; mRNA.
DR EMBL; BC060547; AAH60547.1; -; mRNA.
DR RefSeq; NP_579831.2; NM_133297.2.
DR CORUM; Q923V8; -.
DR IntAct; Q923V8; 1.
DR jPOST; Q923V8; -.
DR PRIDE; Q923V8; -.
DR Ensembl; ENSRNOT00000083750; ENSRNOP00000075579; ENSRNOG00000055257.
DR GeneID; 113922; -.
DR KEGG; rno:113922; -.
DR CTD; 9403; -.
DR RGD; 621291; Selenof.
DR GeneTree; ENSGT00940000154284; -.
DR InParanoid; Q923V8; -.
DR OrthoDB; 1405992at2759; -.
DR PhylomeDB; Q923V8; -.
DR TreeFam; TF315117; -.
DR PRO; PR:Q923V8; -.
DR Proteomes; UP000002494; Chromosome 2.
DR GO; GO:0005788; C:endoplasmic reticulum lumen; ISS:UniProtKB.
DR GO; GO:0016491; F:oxidoreductase activity; IBA:GO_Central.
DR GO; GO:0008430; F:selenium binding; IDA:UniProtKB.
DR GO; GO:0008379; F:thioredoxin peroxidase activity; IDA:RGD.
DR GO; GO:0051084; P:'de novo' post-translational protein folding; TAS:UniProtKB.
DR GO; GO:0035092; P:sperm DNA condensation; IMP:RGD.
DR Gene3D; 3.40.30.50; -; 1.
DR InterPro; IPR038219; Sep15/SelM_sf.
DR InterPro; IPR039992; Sep15_SelM.
DR InterPro; IPR014912; Sep15_SelM_dom.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR PANTHER; PTHR13077; PTHR13077; 1.
DR Pfam; PF08806; Sep15_SelM; 1.
DR SUPFAM; SSF52833; SSF52833; 1.
PE 1: Evidence at protein level;
KW Endoplasmic reticulum; Reference proteome; Selenocysteine; Signal.
FT SIGNAL 1..28
FT /evidence="ECO:0000255"
FT CHAIN 29..162
FT /note="Selenoprotein F"
FT /id="PRO_0000022310"
FT NON_STD 93
FT /note="Selenocysteine"
SQ SEQUENCE 162 AA; 17822 MW; 604590968C81885C CRC64;
MAAGQGGWLR PALGLRLLLA TAFQAVSALG AEFSSEACRE LGFSSNLLCS SCDLLGQFNL
LPLDPVCRGC CQEEAQFETK KLYAGAILEV CGUKLGRFPQ VQAFVRSDKP KLFRGLQIKY
VRGSDPVLKL LDDNGNIAEE LSILKWNTDS VEEFLSEKLE RI