BGL28_ORYSJ
ID BGL28_ORYSJ Reviewed; 500 AA.
AC Q7EXZ4; A0A0P0XHI3; Q0J4J9;
DT 15-DEC-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Beta-glucosidase 28;
DE Short=Os8bglu28;
DE EC=3.2.1.21;
DE Flags: Precursor;
GN Name=BGLU28; OrderedLocusNames=Os08g0509400, LOC_Os08g39870;
GN ORFNames=B1168A08.31, OSJNBa0016N23.106;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=17196101; DOI=10.1186/1471-2229-6-33;
RA Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A.,
RA Ketudat Cairns J.R.;
RT "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12
RT beta-glucosidase.";
RL BMC Plant Biol. 6:33-33(2006).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of terminal, non-reducing beta-D-glucosyl residues
CC with release of beta-D-glucose.; EC=3.2.1.21;
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF24116.2; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AP005816; BAD10672.1; -; Genomic_DNA.
DR EMBL; AP006049; BAD10731.1; -; Genomic_DNA.
DR EMBL; AP008214; BAF24116.2; ALT_INIT; Genomic_DNA.
DR EMBL; AP014964; BAT06184.1; -; Genomic_DNA.
DR EMBL; AK105908; BAG97431.1; -; mRNA.
DR RefSeq; XP_015648468.1; XM_015792982.1.
DR RefSeq; XP_015648469.1; XM_015792983.1.
DR AlphaFoldDB; Q7EXZ4; -.
DR SMR; Q7EXZ4; -.
DR STRING; 4530.OS08T0509400-01; -.
DR PaxDb; Q7EXZ4; -.
DR PRIDE; Q7EXZ4; -.
DR EnsemblPlants; Os08t0509400-01; Os08t0509400-01; Os08g0509400.
DR GeneID; 4345996; -.
DR Gramene; Os08t0509400-01; Os08t0509400-01; Os08g0509400.
DR KEGG; osa:4345996; -.
DR eggNOG; KOG0626; Eukaryota.
DR HOGENOM; CLU_001859_1_0_1; -.
DR InParanoid; Q7EXZ4; -.
DR OMA; KDETRIM; -.
DR OrthoDB; 408001at2759; -.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000059680; Chromosome 8.
DR Genevisible; Q7EXZ4; OS.
DR GO; GO:0033907; F:beta-D-fucosidase activity; IEA:UniProt.
DR GO; GO:0004565; F:beta-galactosidase activity; IEA:UniProt.
DR GO; GO:0008422; F:beta-glucosidase activity; IBA:GO_Central.
DR GO; GO:0102483; F:scopolin beta-glucosidase activity; IEA:UniProtKB-EC.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR InterPro; IPR001360; Glyco_hydro_1.
DR InterPro; IPR033132; Glyco_hydro_1_N_CS.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR10353; PTHR10353; 1.
DR Pfam; PF00232; Glyco_hydro_1; 1.
DR PRINTS; PR00131; GLHYDRLASE1.
DR SUPFAM; SSF51445; SSF51445; 1.
DR PROSITE; PS00653; GLYCOSYL_HYDROL_F1_2; 1.
PE 2: Evidence at transcript level;
KW Disulfide bond; Glycoprotein; Glycosidase; Hydrolase; Reference proteome;
KW Signal.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..500
FT /note="Beta-glucosidase 28"
FT /id="PRO_0000390345"
FT ACT_SITE 192
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT ACT_SITE 408
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT BINDING 45
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 146
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 191
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 337
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 457
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 464..465
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT CARBOHYD 111
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 362
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 409
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 415
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 416
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 211..219
FT /evidence="ECO:0000250"
SQ SEQUENCE 500 AA; 56559 MW; DFD5BF81DBA8CCD8 CRC64;
MDRRLLLSAL LFIALACSSN RVHGALNRHS FPEGFLFGTG TSAYQYEGAV DKRGQNIWDT
FSRIPGKIAD GSNADIANDF YHRYKEDLNL ITAMNMDSFR FSIAWSRILP NGTISGGINK
EGVEFYNSLI NEVIAKGLKP FVTIFHFDTP QALEDKYGGF LSENIVKDYV DYADLCFSLF
GDRVKLWNTF NEPTIFCMNG YATGIMAPGR CSPYASASCA AGGDSGREPY VAGHHLLVAH
AEAVRLYRAR YRAAHGGEVG ITQVSHWFEP YDAGSAADRR ARRRALDFML GWFMHPVAHG
EYPPAMRRLV GGRLPAFTAE QSEMLRGSFD FIGLNYYTSN YAVAAPPPNK LHPSYLTDNW
VNATGYRNSI PIGPPAYTPI FFNYPPGLRE LLLYVKRRYN NPTIYITENG TDEANNSTIP
ISEALKDETR IGFHYKHLQF VHKAIQEGVK VKGYFTWTFM DCFEFGDGFK DRFGLIYVDR
ATLARFRKKS SYWFADFLRR
