SGCR_ECOLI
ID SGCR_ECOLI Reviewed; 260 AA.
AC P39361; Q2M615;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 03-AUG-2022, entry version 143.
DE RecName: Full=Putative sgc region transcriptional regulator;
GN Name=sgcR; Synonyms=yjhJ; OrderedLocusNames=b4300, JW4262;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=7610040; DOI=10.1093/nar/23.12.2105;
RA Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.;
RT "Analysis of the Escherichia coli genome VI: DNA sequence of the region
RT from 92.8 through 100 minutes.";
RL Nucleic Acids Res. 23:2105-2119(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP DISCUSSION OF SEQUENCE.
RA Reizer J., Charbit A., Reizer A., Saier M.H. Jr.;
RT "Novel phosphotransferases system genes revealed by bacterial genome
RT analysis: operons encoding homologues of sugar-specific permease domains of
RT the phosphotransferase system and pentose catabolic enzymes.";
RL Genome Sci. Technol. 1:53-75(1996).
CC -!- FUNCTION: Putative transcriptional regulator for the sgcREAQCX region.
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DR EMBL; U14003; AAA97196.1; -; Genomic_DNA.
DR EMBL; U00096; AAC77256.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE78291.1; -; Genomic_DNA.
DR PIR; S56525; S56525.
DR RefSeq; NP_418720.1; NC_000913.3.
DR RefSeq; WP_000082780.1; NZ_SSUV01000012.1.
DR AlphaFoldDB; P39361; -.
DR SMR; P39361; -.
DR BioGRID; 4260977; 18.
DR DIP; DIP-10880N; -.
DR IntAct; P39361; 1.
DR STRING; 511145.b4300; -.
DR PaxDb; P39361; -.
DR PRIDE; P39361; -.
DR DNASU; 946830; -.
DR EnsemblBacteria; AAC77256; AAC77256; b4300.
DR EnsemblBacteria; BAE78291; BAE78291; BAE78291.
DR GeneID; 946830; -.
DR KEGG; ecj:JW4262; -.
DR KEGG; eco:b4300; -.
DR PATRIC; fig|1411691.4.peg.2397; -.
DR EchoBASE; EB2440; -.
DR eggNOG; COG1349; Bacteria.
DR HOGENOM; CLU_060699_0_1_6; -.
DR OMA; RRNICLV; -.
DR PhylomeDB; P39361; -.
DR BioCyc; EcoCyc:G7913-MON; -.
DR PRO; PR:P39361; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR014036; DeoR_C.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR037171; NagB/RpiA_transferase-like.
DR InterPro; IPR018356; Tscrpt_reg_HTH_DeoR_CS.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF00455; DeoRC; 1.
DR Pfam; PF08220; HTH_DeoR; 1.
DR SMART; SM00420; HTH_DEOR; 1.
DR SUPFAM; SSF100950; SSF100950; 1.
DR PROSITE; PS00894; HTH_DEOR_1; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..260
FT /note="Putative sgc region transcriptional regulator"
FT /id="PRO_0000050267"
FT DOMAIN 5..61
FT /note="HTH deoR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00349"
FT DNA_BIND 22..41
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00349"
SQ SEQUENCE 260 AA; 29268 MW; 3DF397A5EFFCD5F9 CRC64;
MSQQRPDRIK QMLHYLWQHR HLSTQQAMEL FGYAEATVRR DFQYIVNQYP GMIRGHGCLD
FDDSTDDKEY VFDVKRTLQS VAKREIAALA RTMIKDGDCF FLDSGSTCLE LAKCLADARV
KVICNDIKIA NELGCFPHVE SYIIGGLIRP GYFSVGESLA LEMINAFSVE RAFISCDALS
LETGITNATM FEVGVKTRII QRSREVILMA DHSKFDAVEP HAVATLSCIK TIISDSGLPE
TIAQRYQRAG CQLFLPHSIK
