SGRL_ORYSJ
ID SGRL_ORYSJ Reviewed; 258 AA.
AC Q0J8Q3; A0A0P0WGU0; Q7XK94;
DT 19-FEB-2014, integrated into UniProtKB/Swiss-Prot.
DT 03-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=Protein STAY-GREEN LIKE, chloroplastic;
GN OrderedLocusNames=Os04g0692600, LOC_Os04g59610;
GN ORFNames=OsJ_16753, OSJNBb0020J19.16;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, AND INDUCTION BY
RP DARK-INDUCED SENESCENCE.
RX PubMed=23816327; DOI=10.1016/j.jplph.2013.05.016;
RA Rong H., Tang Y., Zhang H., Wu P., Chen Y., Li M., Wu G., Jiang H.;
RT "The Stay-Green Rice like (SGRL) gene regulates chlorophyll degradation in
RT rice.";
RL J. Plant Physiol. 170:1367-1373(2013).
CC -!- FUNCTION: Promotes chlorophyll degradation in leaves. May be involved
CC in LHCI proteins degradation, regulating the balance between LHCI and
CC LHCII. {ECO:0000269|PubMed:23816327}.
CC -!- TISSUE SPECIFICITY: Strongly expressed in leaves, stems and panicles,
CC and at lower levels in roots and seeds. {ECO:0000269|PubMed:23816327}.
CC -!- DEVELOPMENTAL STAGE: Higher expression in young leaves. Down-regulated
CC during dark-induced and natural senescence.
CC {ECO:0000269|PubMed:23816327}.
CC -!- INDUCTION: Down-regulated by dark-induced senescence. Circadian-
CC regulation with a strong expression during the transition from dark to
CC light. {ECO:0000269|PubMed:23816327}.
CC -!- SIMILARITY: Belongs to the staygreen family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAE05787.3; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL606656; CAE05787.3; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008210; BAF16284.1; -; Genomic_DNA.
DR EMBL; AP014960; BAS91800.1; -; Genomic_DNA.
DR EMBL; CM000141; EEE61976.1; -; Genomic_DNA.
DR EMBL; AK105888; BAG97418.1; -; mRNA.
DR EMBL; AK105982; BAG97482.1; -; mRNA.
DR AlphaFoldDB; Q0J8Q3; -.
DR STRING; 4530.OS04T0692600-02; -.
DR PRIDE; Q0J8Q3; -.
DR EnsemblPlants; Os04t0692600-01; Os04t0692600-01; Os04g0692600.
DR EnsemblPlants; Os04t0692600-03; Os04t0692600-03; Os04g0692600.
DR Gramene; Os04t0692600-01; Os04t0692600-01; Os04g0692600.
DR Gramene; Os04t0692600-03; Os04t0692600-03; Os04g0692600.
DR eggNOG; ENOG502QS93; Eukaryota.
DR HOGENOM; CLU_073517_1_0_1; -.
DR InParanoid; Q0J8Q3; -.
DR OMA; PFPRAYT; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000007752; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR Genevisible; Q0J8Q3; OS.
DR InterPro; IPR024438; Staygreen.
DR Pfam; PF12638; Staygreen; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..258
FT /note="Protein STAY-GREEN LIKE, chloroplastic"
FT /id="PRO_0000425238"
SQ SEQUENCE 258 AA; 28181 MW; 451B1A9F9EF53D3B CRC64;
MPIEAVAVAS LPMASRSAAL CFSSAAAARS RSRSRHGRMA VSCDAGASDL LYSSLAAKLL
GPPTSFDAGK LTVEFAHSHG NSSSGFPRAY TLTHCDFTAN LTLAVSDTIA ADRRLRADDV
FAEWKQQQQQ EGMALHVHCF VSGANLLHGL AAGFRYYVFS KELPLVLKAV VHGDALLFAE
QPELLEAKVW VHFHSSSNAK YNRLECWGPL REAANAETTH KRHALEQLHN AITKGTRRRR
RKWSSPDAIF SALLALLL