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SHPS1_MOUSE
ID   SHPS1_MOUSE             Reviewed;         513 AA.
AC   P97797; A0A0R4J1Z7; E0CYM8; E9QPT7; O08907; O35924; O88555; O88556; P97796;
AC   Q8R559; Q9QX57; Q9WTN4;
DT   28-MAR-2003, integrated into UniProtKB/Swiss-Prot.
DT   08-MAY-2019, sequence version 2.
DT   03-AUG-2022, entry version 191.
DE   RecName: Full=Tyrosine-protein phosphatase non-receptor type substrate 1;
DE            Short=SHP substrate 1;
DE            Short=SHPS-1;
DE   AltName: Full=Brain Ig-like molecule with tyrosine-based activation motifs;
DE            Short=Bit;
DE   AltName: Full=CD172 antigen-like family member A;
DE   AltName: Full=Inhibitory receptor SHPS-1;
DE   AltName: Full=MyD-1 antigen;
DE   AltName: Full=Signal-regulatory protein alpha-1;
DE            Short=Sirp-alpha-1;
DE            Short=mSIRP-alpha1;
DE   AltName: Full=p84;
DE   AltName: CD_antigen=CD172a;
DE   Flags: Precursor;
GN   Name=Sirpa; Synonyms=Bit, Myd1, Ptpns1, Shps1, Sirp;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2).
RC   TISSUE=Brain;
RX   PubMed=9070220; DOI=10.1006/bbrc.1996.6047;
RA   Yamao T., Matozaki T., Amano K., Matsuda Y., Takahashi N., Ochi F.,
RA   Fujioka Y., Kasuga M.;
RT   "Mouse and human SHPS-1: molecular cloning of cDNAs and chromosomal
RT   localization of genes.";
RL   Biochem. Biophys. Res. Commun. 231:61-67(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
RC   STRAIN=BALB/cJ; TISSUE=Brain;
RX   PubMed=9073522; DOI=10.1006/geno.1996.4581;
RA   Ohnishi H., Kubota M., Sano S.;
RT   "BIT (Bit) maps to mouse chromosome 2.";
RL   Genomics 40:504-506(1997).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 2 AND 3), PROTEIN SEQUENCE OF 32-53
RP   AND 422-433 (ISOFORM 2), GLYCOSYLATION, AND TISSUE SPECIFICITY.
RC   STRAIN=BALB/cJ; TISSUE=Brain, and Cerebellum;
RX   PubMed=9348339; DOI=10.1523/jneurosci.17-22-08702.1997;
RA   Comu S., Weng W., Olinsky S., Ishwad P., Mi Z., Hempel J., Watkins S.,
RA   Lagenaur C.F., Narayanan V.;
RT   "The murine P84 neural adhesion molecule is SHPS-1, a member of the
RT   phosphatase-binding protein family.";
RL   J. Neurosci. 17:8702-8710(1997).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 2 AND 4), GLYCOSYLATION,
RP   PHOSPHORYLATION AT TYROSINE RESIDUES, INTERACTION WITH PTPN6, AND TISSUE
RP   SPECIFICITY.
RC   STRAIN=C57BL/6J; TISSUE=Fetal thymus;
RX   PubMed=9712903; DOI=10.1074/jbc.273.35.22719;
RA   Veillette A., Thibaudeau E., Latour S.;
RT   "High expression of inhibitory receptor SHPS-1 and its association with
RT   protein tyrosine phosphatase SHP-1 in macrophages.";
RL   J. Biol. Chem. 273:22719-22728(1998).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORMS 1; 2 AND 3), AND
RP   GLYCOSYLATION.
RC   STRAIN=129/SvJ, and C57BL/6J; TISSUE=Brain, and Liver;
RX   PubMed=10585853; DOI=10.1042/bj3440667;
RA   Sano S., Ohnishi H., Kubota M.;
RT   "Gene structure of mouse BIT/SHPS-1.";
RL   Biochem. J. 344:667-675(1999).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
RC   STRAIN=ILS, and ISS;
RX   PubMed=11471062; DOI=10.1007/s00335-001-1001-x;
RA   Ehringer M.A., Thompson J., Conroy O., Xu Y., Yang F., Canniff J.,
RA   Beeson M., Gordon L., Bennett B., Johnson T.E., Sikela J.M.;
RT   "High-throughput sequence identification of gene coding variants within
RT   alcohol-related QTLs.";
RL   Mamm. Genome 12:657-663(2001).
RN   [7]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 1).
RC   TISSUE=Placenta;
RA   Wang H., Chen Z., Ullrich A.;
RT   "Epidermal growth factor-induced association of SHP2 with mouse SIRP-
RT   alpha1.";
RL   Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN   [8]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C57BL/6J;
RX   PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA   Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA   Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA   Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA   Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA   Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA   Eichler E.E., Ponting C.P.;
RT   "Lineage-specific biology revealed by a finished genome assembly of the
RT   mouse.";
RL   PLoS Biol. 7:E1000112-E1000112(2009).
RN   [9]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN   [10]
RP   FUNCTION, TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
RX   PubMed=2303162; DOI=10.1016/0012-1606(90)90249-i;
RA   Chuang W., Lagenaur C.F.;
RT   "Central nervous system antigen P84 can serve as a substrate for neurite
RT   outgrowth.";
RL   Dev. Biol. 137:219-232(1990).
RN   [11]
RP   GLYCOSYLATION, PHOSPHORYLATION BY JAK2 IN RESPONSE TO GROWTH HORMONE, AND
RP   INTERACTION WITH JAK2 AND PTPN11.
RX   PubMed=9507023; DOI=10.1074/jbc.273.12.7112;
RA   Stofega M.R., Wang H., Ullrich A., Carter-Su C.;
RT   "Growth hormone regulation of SIRP and SHP-2 tyrosyl phosphorylation and
RT   association.";
RL   J. Biol. Chem. 273:7112-7117(1998).
RN   [12]
RP   INTERACTION WITH CD47, AND TISSUE SPECIFICITY.
RX   PubMed=9872987; DOI=10.1074/jbc.274.2.559;
RA   Jiang P., Lagenaur C.F., Narayanan V.;
RT   "Integrin-associated protein is a ligand for the P84 neural adhesion
RT   molecule.";
RL   J. Biol. Chem. 274:559-562(1999).
RN   [13]
RP   INTERACTION WITH FGR.
RX   PubMed=10662797; DOI=10.1084/jem.191.3.515;
RA   Gresham H.D., Dale B.M., Potter J.W., Chang P.W., Vines C.M., Lowell C.A.,
RA   Lagenaur C.F., Willman C.L.;
RT   "Negative regulation of phagocytosis in murine macrophages by the Src
RT   kinase family member, Fgr.";
RL   J. Exp. Med. 191:515-528(2000).
RN   [14]
RP   GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-246.
RC   STRAIN=C57BL/6J; TISSUE=Plasma;
RX   PubMed=16944957; DOI=10.1021/pr060186m;
RA   Ghesquiere B., Van Damme J., Martens L., Vandekerckhove J., Gevaert K.;
RT   "Proteome-wide characterization of N-glycosylation events by diagonal
RT   chromatography.";
RL   J. Proteome Res. 5:2438-2447(2006).
RN   [15]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Brain;
RX   PubMed=18034455; DOI=10.1021/pr0701254;
RA   Ballif B.A., Carey G.R., Sunyaev S.R., Gygi S.P.;
RT   "Large-scale identification and evolution indexing of tyrosine
RT   phosphorylation sites from murine brain.";
RL   J. Proteome Res. 7:311-318(2008).
RN   [16]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=19144319; DOI=10.1016/j.immuni.2008.11.006;
RA   Trost M., English L., Lemieux S., Courcelles M., Desjardins M.,
RA   Thibault P.;
RT   "The phagosomal proteome in interferon-gamma-activated macrophages.";
RL   Immunity 30:143-154(2009).
RN   [17]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Brain, Heart, Kidney, Lung, and Spleen;
RX   PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA   Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA   Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT   "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL   Cell 143:1174-1189(2010).
CC   -!- FUNCTION: Immunoglobulin-like cell surface receptor for CD47. Acts as
CC       docking protein and induces translocation of PTPN6, PTPN11 and other
CC       binding partners from the cytosol to the plasma membrane. Supports
CC       adhesion of cerebellar neurons, neurite outgrowth and glial cell
CC       attachment. May play a key role in intracellular signaling during
CC       synaptogenesis and in synaptic function. Involved in the negative
CC       regulation of receptor tyrosine kinase-coupled cellular responses
CC       induced by cell adhesion, growth factors or insulin. Mediates negative
CC       regulation of phagocytosis, mast cell activation and dendritic cell
CC       activation. CD47 binding prevents maturation of immature dendritic
CC       cells and inhibits cytokine production by mature dendritic cells (By
CC       similarity). {ECO:0000250, ECO:0000269|PubMed:2303162}.
CC   -!- SUBUNIT: Binds PTPN11 when tyrosine-phosphorylated, except in
CC       macrophages, where it primarily binds PTPN6. Binds GRB2 vitro. Binds
CC       FGR. Binds JAK2 irrespective of its phosphorylation status and forms a
CC       stable complex. Binds SCAP1 and/or SCAP2. The resulting complex
CC       recruits FYB1. Binds PTK2B (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane protein.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=4;
CC         Comment=Additional isoforms seem to exist.;
CC       Name=1; Synonyms=a;
CC         IsoId=P97797-1; Sequence=Displayed;
CC       Name=2; Synonyms=a', Large;
CC         IsoId=P97797-2; Sequence=VSP_007032;
CC       Name=3; Synonyms=b, Small;
CC         IsoId=P97797-3; Sequence=VSP_007031;
CC       Name=4;
CC         IsoId=P97797-4; Sequence=VSP_007031, VSP_007032;
CC   -!- TISSUE SPECIFICITY: Highly expressed in cerebral cortex, brain, spinal
CC       cord, cerebellum and spleen, and at much lower levels in kidney,
CC       thymus, heart, lung and liver. Within the cerebellum, highly expressed
CC       throughout the molecular layer, and in synaptic glomeruli in the
CC       granule cell layer. Detected in neurons of the hippocampus and dentate
CC       gyrus, and in olfactory bulb. Not detected in Purkinje cells. Highly
CC       expressed in the plexiform layers, optic fiber layer and the outer
CC       segments of the photoreceptor layer in the retina. Highly expressed in
CC       macrophages. Isoform 3 is detected at very low levels in all tissues
CC       tested. {ECO:0000269|PubMed:2303162, ECO:0000269|PubMed:9348339,
CC       ECO:0000269|PubMed:9712903, ECO:0000269|PubMed:9872987}.
CC   -!- DEVELOPMENTAL STAGE: Highly expressed in the CNS of embryos from day 7
CC       to 17. {ECO:0000269|PubMed:2303162}.
CC   -!- PTM: N-glycosylated. {ECO:0000269|PubMed:10585853,
CC       ECO:0000269|PubMed:16944957, ECO:0000269|PubMed:9348339,
CC       ECO:0000269|PubMed:9507023, ECO:0000269|PubMed:9712903}.
CC   -!- PTM: Phosphorylated on tyrosine residues. {ECO:0000269|PubMed:9507023,
CC       ECO:0000269|PubMed:9712903}.
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DR   EMBL; D87967; BAA13520.1; -; mRNA.
DR   EMBL; D87968; BAA13521.1; -; mRNA.
DR   EMBL; D85785; BAA20376.1; -; mRNA.
DR   EMBL; U89694; AAB92591.1; -; mRNA.
DR   EMBL; AF072543; AAC24886.1; -; mRNA.
DR   EMBL; AF072544; AAC24887.1; -; mRNA.
DR   EMBL; AB024507; BAA89290.1; -; Genomic_DNA.
DR   EMBL; AB018194; BAA76555.1; -; mRNA.
DR   EMBL; AB024507; BAA89289.1; -; Genomic_DNA.
DR   EMBL; AF332079; AAK56107.1; -; mRNA.
DR   EMBL; AF332080; AAK56108.1; -; mRNA.
DR   EMBL; Y10349; CAA71375.1; -; mRNA.
DR   EMBL; AL808126; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CH466519; EDL28242.1; -; Genomic_DNA.
DR   CCDS; CCDS16729.1; -. [P97797-2]
DR   CCDS; CCDS50708.1; -. [P97797-4]
DR   CCDS; CCDS71142.1; -. [P97797-1]
DR   CCDS; CCDS71143.1; -. [P97797-3]
DR   PIR; JC5288; JC5288.
DR   PIR; JC5289; JC5289.
DR   RefSeq; NP_001171118.1; NM_001177647.2. [P97797-4]
DR   RefSeq; NP_001277948.1; NM_001291019.1. [P97797-1]
DR   RefSeq; NP_001277949.1; NM_001291020.1. [P97797-1]
DR   RefSeq; NP_001277950.1; NM_001291021.1. [P97797-3]
DR   RefSeq; NP_031573.2; NM_007547.4. [P97797-2]
DR   RefSeq; XP_006499049.1; XM_006498986.3. [P97797-1]
DR   RefSeq; XP_017172050.1; XM_017316561.1.
DR   RefSeq; XP_017172057.1; XM_017316568.1. [P97797-3]
DR   RefSeq; XP_017172058.1; XM_017316569.1. [P97797-4]
DR   PDB; 2YZ1; X-ray; 1.40 A; A/B=32-146.
DR   PDBsum; 2YZ1; -.
DR   AlphaFoldDB; P97797; -.
DR   SMR; P97797; -.
DR   BioGRID; 202490; 12.
DR   CORUM; P97797; -.
DR   IntAct; P97797; 4.
DR   STRING; 10090.ENSMUSP00000099491; -.
DR   GlyConnect; 2714; 29 N-Linked glycans (13 sites).
DR   GlyGen; P97797; 17 sites, 28 N-linked glycans (13 sites).
DR   iPTMnet; P97797; -.
DR   PhosphoSitePlus; P97797; -.
DR   jPOST; P97797; -.
DR   MaxQB; P97797; -.
DR   PaxDb; P97797; -.
DR   PeptideAtlas; P97797; -.
DR   PRIDE; P97797; -.
DR   ProteomicsDB; 261353; -. [P97797-1]
DR   ProteomicsDB; 261354; -. [P97797-2]
DR   ProteomicsDB; 261355; -. [P97797-3]
DR   ProteomicsDB; 328968; -.
DR   ProteomicsDB; 339176; -.
DR   ProteomicsDB; 367856; -.
DR   ABCD; P97797; 27 sequenced antibodies.
DR   DNASU; 19261; -.
DR   Ensembl; ENSMUST00000049262; ENSMUSP00000049022; ENSMUSG00000037902. [P97797-1]
DR   Ensembl; ENSMUST00000099113; ENSMUSP00000096713; ENSMUSG00000037902. [P97797-3]
DR   Ensembl; ENSMUST00000103202; ENSMUSP00000099491; ENSMUSG00000037902. [P97797-2]
DR   Ensembl; ENSMUST00000103203; ENSMUSP00000099492; ENSMUSG00000037902. [P97797-2]
DR   Ensembl; ENSMUST00000160276; ENSMUSP00000125004; ENSMUSG00000037902. [P97797-4]
DR   Ensembl; ENSMUST00000161620; ENSMUSP00000124048; ENSMUSG00000037902. [P97797-1]
DR   Ensembl; ENSMUST00000179001; ENSMUSP00000137611; ENSMUSG00000037902. [P97797-2]
DR   GeneID; 19261; -.
DR   KEGG; mmu:19261; -.
DR   UCSC; uc008mhz.1; mouse.
DR   CTD; 140885; -.
DR   MGI; MGI:108563; Sirpa.
DR   VEuPathDB; HostDB:ENSMUSG00000037902; -.
DR   eggNOG; ENOG502S1XD; Eukaryota.
DR   GeneTree; ENSGT00960000186656; -.
DR   HOGENOM; CLU_044430_2_0_1; -.
DR   InParanoid; P97797; -.
DR   OMA; DNTETHN; -.
DR   OrthoDB; 904196at2759; -.
DR   Reactome; R-MMU-202733; Cell surface interactions at the vascular wall.
DR   Reactome; R-MMU-2172127; DAP12 interactions.
DR   Reactome; R-MMU-391160; Signal regulatory protein family interactions.
DR   Reactome; R-MMU-6798695; Neutrophil degranulation.
DR   BioGRID-ORCS; 19261; 4 hits in 75 CRISPR screens.
DR   ChiTaRS; Sirpa; mouse.
DR   EvolutionaryTrace; P97797; -.
DR   PRO; PR:P97797; -.
DR   Proteomes; UP000000589; Chromosome 2.
DR   RNAct; P97797; protein.
DR   Bgee; ENSMUSG00000037902; Expressed in stroma of bone marrow and 266 other tissues.
DR   ExpressionAtlas; P97797; baseline and differential.
DR   GO; GO:0009986; C:cell surface; ISO:MGI.
DR   GO; GO:0005887; C:integral component of plasma membrane; IDA:MGI.
DR   GO; GO:0016020; C:membrane; ISO:MGI.
DR   GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR   GO; GO:0098632; F:cell-cell adhesion mediator activity; ISO:MGI.
DR   GO; GO:0030695; F:GTPase regulator activity; ISO:MGI.
DR   GO; GO:1990405; F:protein antigen binding; ISO:MGI.
DR   GO; GO:0086080; F:protein binding involved in heterotypic cell-cell adhesion; ISO:MGI.
DR   GO; GO:0019903; F:protein phosphatase binding; IPI:ARUK-UCL.
DR   GO; GO:0045309; F:protein phosphorylated amino acid binding; IPI:MGI.
DR   GO; GO:1990782; F:protein tyrosine kinase binding; ISO:MGI.
DR   GO; GO:0017124; F:SH3 domain binding; IEA:UniProtKB-KW.
DR   GO; GO:0007015; P:actin filament organization; IMP:MGI.
DR   GO; GO:0016477; P:cell migration; ISO:MGI.
DR   GO; GO:0007160; P:cell-matrix adhesion; IMP:MGI.
DR   GO; GO:0070301; P:cellular response to hydrogen peroxide; ISO:MGI.
DR   GO; GO:0071346; P:cellular response to interferon-gamma; ISO:MGI.
DR   GO; GO:0071347; P:cellular response to interleukin-1; ISO:MGI.
DR   GO; GO:0071222; P:cellular response to lipopolysaccharide; IDA:ARUK-UCL.
DR   GO; GO:0007010; P:cytoskeleton organization; IMP:MGI.
DR   GO; GO:0097530; P:granulocyte migration; IGI:ARUK-UCL.
DR   GO; GO:0002244; P:hematopoietic progenitor cell differentiation; IMP:MGI.
DR   GO; GO:0035696; P:monocyte extravasation; ISO:MGI.
DR   GO; GO:0071650; P:negative regulation of chemokine (C-C motif) ligand 5 production; IMP:ARUK-UCL.
DR   GO; GO:1900016; P:negative regulation of cytokine production involved in inflammatory response; IMP:ARUK-UCL.
DR   GO; GO:0070373; P:negative regulation of ERK1 and ERK2 cascade; IMP:ARUK-UCL.
DR   GO; GO:1903720; P:negative regulation of I-kappaB phosphorylation; IMP:ARUK-UCL.
DR   GO; GO:0032688; P:negative regulation of interferon-beta production; IMP:ARUK-UCL.
DR   GO; GO:0032715; P:negative regulation of interleukin-6 production; IMP:ARUK-UCL.
DR   GO; GO:0046329; P:negative regulation of JNK cascade; IMP:ARUK-UCL.
DR   GO; GO:0071641; P:negative regulation of macrophage inflammatory protein 1 alpha production; IMP:ARUK-UCL.
DR   GO; GO:0045019; P:negative regulation of nitric oxide biosynthetic process; IMP:ARUK-UCL.
DR   GO; GO:0050765; P:negative regulation of phagocytosis; IMP:ARUK-UCL.
DR   GO; GO:0001933; P:negative regulation of protein phosphorylation; IMP:ARUK-UCL.
DR   GO; GO:0032720; P:negative regulation of tumor necrosis factor production; IMP:ARUK-UCL.
DR   GO; GO:0006911; P:phagocytosis, engulfment; IDA:MGI.
DR   GO; GO:0006910; P:phagocytosis, recognition; IDA:MGI.
DR   GO; GO:0050766; P:positive regulation of phagocytosis; IDA:MGI.
DR   GO; GO:0050870; P:positive regulation of T cell activation; IBA:GO_Central.
DR   GO; GO:0032651; P:regulation of interleukin-1 beta production; ISO:MGI.
DR   GO; GO:0032675; P:regulation of interleukin-6 production; ISO:MGI.
DR   GO; GO:0045428; P:regulation of nitric oxide biosynthetic process; ISO:MGI.
DR   GO; GO:0032680; P:regulation of tumor necrosis factor production; ISO:MGI.
DR   Gene3D; 2.60.40.10; -; 3.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR003006; Ig/MHC_CS.
DR   InterPro; IPR003597; Ig_C1-set.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR013106; Ig_V-set.
DR   Pfam; PF07654; C1-set; 2.
DR   Pfam; PF07686; V-set; 1.
DR   SMART; SM00409; IG; 2.
DR   SMART; SM00407; IGc1; 2.
DR   SUPFAM; SSF48726; SSF48726; 3.
DR   PROSITE; PS50835; IG_LIKE; 3.
DR   PROSITE; PS00290; IG_MHC; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Alternative splicing; Direct protein sequencing;
KW   Disulfide bond; Glycoprotein; Immunoglobulin domain; Membrane;
KW   Phosphoprotein; Reference proteome; Repeat; SH3-binding; Signal;
KW   Transmembrane; Transmembrane helix.
FT   SIGNAL          1..31
FT   CHAIN           32..513
FT                   /note="Tyrosine-protein phosphatase non-receptor type
FT                   substrate 1"
FT                   /id="PRO_0000014942"
FT   TOPO_DOM        32..373
FT                   /note="Extracellular"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        374..394
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        395..511
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   DOMAIN          32..137
FT                   /note="Ig-like V-type"
FT   DOMAIN          149..248
FT                   /note="Ig-like C1-type 1"
FT   DOMAIN          255..343
FT                   /note="Ig-like C1-type 2"
FT   REGION          444..513
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOTIF           440..443
FT                   /note="SH2-binding"
FT                   /evidence="ECO:0000255"
FT   MOTIF           450..455
FT                   /note="SH3-binding"
FT                   /evidence="ECO:0000255"
FT   MOTIF           464..467
FT                   /note="SH2-binding"
FT                   /evidence="ECO:0000255"
FT   MOTIF           481..484
FT                   /note="SH2-binding"
FT                   /evidence="ECO:0000255"
FT   MOTIF           505..508
FT                   /note="SH2-binding"
FT                   /evidence="ECO:0000255"
FT   MOD_RES         440
FT                   /note="Phosphotyrosine; by Tyr-kinases"
FT                   /evidence="ECO:0000255"
FT   MOD_RES         464
FT                   /note="Phosphotyrosine; by Tyr-kinases"
FT                   /evidence="ECO:0000255"
FT   MOD_RES         481
FT                   /note="Phosphotyrosine; by Tyr-kinases"
FT                   /evidence="ECO:0000250|UniProtKB:P97710"
FT   MOD_RES         505
FT                   /note="Phosphotyrosine; by Tyr-kinases"
FT                   /evidence="ECO:0000250|UniProtKB:P97710"
FT   CARBOHYD        54
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        92
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        168
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        180
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        205
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        209
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        246
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000269|PubMed:16944957"
FT   CARBOHYD        271
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        293
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        302
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        312
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        320
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        345
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        367
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   DISULFID        55..121
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT   DISULFID        171..229
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT   DISULFID        274..332
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT   VAR_SEQ         147..364
FT                   /note="Missing (in isoform 3 and isoform 4)"
FT                   /evidence="ECO:0000303|PubMed:10585853,
FT                   ECO:0000303|PubMed:9348339, ECO:0000303|PubMed:9712903"
FT                   /id="VSP_007031"
FT   VAR_SEQ         425..428
FT                   /note="Missing (in isoform 2 and isoform 4)"
FT                   /evidence="ECO:0000303|PubMed:10585853,
FT                   ECO:0000303|PubMed:9070220, ECO:0000303|PubMed:9073522,
FT                   ECO:0000303|PubMed:9348339, ECO:0000303|PubMed:9712903"
FT                   /id="VSP_007032"
FT   CONFLICT        6
FT                   /note="Missing (in Ref. 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        10
FT                   /note="R -> L (in Ref. 3; AAB92591)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        29
FT                   /note="A -> V (in Ref. 1; BAA13520/BAA13521, 5; BAA89289/
FT                   BAA89290, 6; AAK56107 and 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        32
FT                   /note="K -> T (in Ref. 2; BAA20376)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        34
FT                   /note="L -> V (in Ref. 2; BAA20376)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        52
FT                   /note="V -> I (in Ref. 2; BAA20376)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        57
FT                   /note="L -> V (in Ref. 2; BAA20376)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        67
FT                   /note="R -> K (in Ref. 1; BAA13520/BAA13521, 3; AAB92591,
FT                   5; BAA89289/BAA89290, 6; AAK56107 and 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        74..77
FT                   /note="PSRL -> KAGC (in Ref. 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        74
FT                   /note="P -> Q (in Ref. 1; BAA13520/BAA13521, 2; BAA20376,
FT                   3; AAB92591, 5; BAA89289/BAA89290 and 6; AAK56107)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        83
FT                   /note="A -> T (in Ref. 1; BAA13520/BAA13521, 2; BAA20376,
FT                   3; AAB92591, 5; BAA89289/BAA89290, 6; AAK56107 and 7;
FT                   CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        86
FT                   /note="Y -> H (in Ref. 1; BAA13520/BAA13521, 2; BAA20376,
FT                   3; AAB92591, 5; BAA89289/BAA89290, 6; AAK56107 and 7;
FT                   CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        87
FT                   /note="V -> F (in Ref. 1; BAA13520/BAA13521, 2; BAA20376,
FT                   3; AAB92591, 5; BAA89289/BAA89290, 6; AAK56107 and 7;
FT                   CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        90
FT                   /note="I -> V (in Ref. 1; BAA13520/BAA13521, 2; BAA20376,
FT                   3; AAB92591, 5; BAA89289/BAA89290, 6; AAK56107 and 7;
FT                   CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        91
FT                   /note="R -> T (in Ref. 1; BAA13520/BAA13521, 5; BAA89289/
FT                   BAA89290, 6; AAK56107 and 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        96
FT                   /note="T -> A (in Ref. 1; BAA13520/BAA13521, 5; BAA89289/
FT                   BAA89290, 6; AAK56107 and 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        114
FT                   /note="A -> E (in Ref. 1; BAA13520/BAA13521, 2; BAA20376,
FT                   3; AAB92591, 5; BAA89289/BAA89290, 6; AAK56107 and 7;
FT                   CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        118
FT                   /note="I -> T (in Ref. 1; BAA13520/BAA13521, 2; BAA20376,
FT                   3; AAB92591, 5; BAA89289/BAA89290, 6; AAK56107 and 7;
FT                   CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        126
FT                   /note="K -> R (in Ref. 2; BAA20376 and 3; AAB92591)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        128
FT                   /note="S -> P (in Ref. 1; BAA13520/BAA13521, 5; BAA89289/
FT                   BAA89290, 6; AAK56107 and 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        154..156
FT                   /note="VSG -> YPV (in Ref. 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        164
FT                   /note="D -> Y (in Ref. 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        194
FT                   /note="P -> H (in Ref. 1; BAA13520/BAA13521, 3; AAB92591,
FT                   5; BAA89289/BAA89290 and 6; AAK56107)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        224
FT                   /note="N -> H (in Ref. 1; BAA13520/BAA13521, 3; AAB92591,
FT                   5; BAA89289/BAA89290, 6; AAK56107 and 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        263
FT                   /note="S -> P (in Ref. 2; BAA20376)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        276
FT                   /note="A -> D (in Ref. 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        351
FT                   /note="F -> L (in Ref. 1; BAA13520/BAA13521, 2; BAA20376,
FT                   3; AAB92591, 5; BAA89289/BAA89290, 6; AAK56107 and 7;
FT                   CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        365
FT                   /note="D -> G (in Ref. 1; BAA13520/BAA13521, 2; BAA20376,
FT                   3; AAB92591, 5; BAA89289/BAA89290, 6; AAK56107 and 7;
FT                   CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        448..458
FT                   /note="EKKPAPRAPEP -> RRKPAPGSLEFL (in Ref. 7; CAA71375)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        490
FT                   /note="S -> N (in Ref. 2; BAA20376 and 3; AAB92591)"
FT                   /evidence="ECO:0000305"
FT   STRAND          40..45
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          51..53
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          56..58
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          66..73
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          77..82
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   TURN            87..89
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          92..95
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          98..100
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          106..108
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   HELIX           113..115
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          117..125
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          128..131
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          133..137
FT                   /evidence="ECO:0007829|PDB:2YZ1"
FT   STRAND          141..145
FT                   /evidence="ECO:0007829|PDB:2YZ1"
SQ   SEQUENCE   513 AA;  56414 MW;  F3C483B0DC99BD9A CRC64;
     MEPAGPAPGR LGPLLLCLLL SASCFCTGAT GKELKVTQPE KSVSVAAGDS TVLNCTLTSL
     LPVGPIRWYR GVGPSRLLIY SFAGEYVPRI RNVSDTTKRN NMDFSIRISN VTPADAGIYY
     CVKFQKGSSE PDTEIQSGGG TEVYVLAKPS PPEVSGPADR GIPDQKVNFT CKSHGFSPRN
     ITLKWFKDGQ ELHPLETTVN PSGKNVSYNI SSTVRVVLNS MDVNSKVICE VAHITLDRSP
     LRGIANLSNF IRVSPTVKVT QQSPTSMNQV NLTCRAERFY PEDLQLIWLE NGNVSRNDTP
     KNLTKNTDGT YNYTSLFLVN SSAHREDVVF TCQVKHDQQP AITRNHTVLG FAHSSDQGSM
     QTFPDNNATH NWNVFIGVGV ACALLVVLLM AALYLLRIKQ KKAKGSTSST RLHEPEKNAR
     EITQVQSLIQ DTNDINDITY ADLNLPKEKK PAPRAPEPNN HTEYASIETG KVPRPEDTLT
     YADLDMVHLS RAQPAPKPEP SFSEYASVQV QRK
 
 
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