BH148_ORYSJ
ID BH148_ORYSJ Reviewed; 299 AA.
AC Q75KV9; A0A0P0W349; F1DKB3;
DT 09-DEC-2015, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=Transcription factor BHLH148 {ECO:0000305};
DE AltName: Full=Basic helix-loop-helix protein 148 {ECO:0000303|PubMed:20472752};
DE Short=OsbHLH148 {ECO:0000303|PubMed:20472752};
DE AltName: Full=bHLH transcription factor bHLH148 {ECO:0000305};
GN Name=BHLH148 {ECO:0000303|PubMed:20472752};
GN OrderedLocusNames=Os03g0741100 {ECO:0000312|EMBL:BAF13135.1},
GN LOC_Os03g53020 {ECO:0000312|EMBL:ABF98794.1};
GN ORFNames=OJ1365_D05.18 {ECO:0000312|EMBL:AAR87309.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=18987217; DOI=10.1104/pp.108.128579;
RA Yilmaz A., Nishiyama M.Y., Fuentes B.G., Souza G.M., Janies D., Gray J.,
RA Grotewold E.;
RT "GRASSIUS: a platform for comparative regulatory genomics across the
RT grasses.";
RL Plant Physiol. 149:171-180(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=20472752; DOI=10.1104/pp.110.153593;
RA Carretero-Paulet L., Galstyan A., Roig-Villanova I., Martinez-Garcia J.F.,
RA Bilbao-Castro J.R., Robertson D.L.;
RT "Genome-wide classification and evolutionary analysis of the bHLH family of
RT transcription factors in Arabidopsis, poplar, rice, moss, and algae.";
RL Plant Physiol. 153:1398-1412(2010).
RN [8]
RP FUNCTION, INTERACTION WITH TIFY10A/JAZ6; TIFY10B/JAZ7; TIFY11A/JAZ9;
RP TIFY11C/JAZ11 AND TIFY11D/JAZ12, AND INDUCTION.
RX PubMed=21332845; DOI=10.1111/j.1365-313x.2010.04477.x;
RA Seo J.S., Joo J., Kim M.J., Kim Y.K., Nahm B.H., Song S.I., Cheong J.J.,
RA Lee J.S., Kim J.K., Choi Y.D.;
RT "OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins
RT in a jasmonate signaling pathway leading to drought tolerance in rice.";
RL Plant J. 65:907-921(2011).
CC -!- FUNCTION: May act on an initial response of jasmonate-regulated gene
CC expression toward drought tolerance as part of a BHLH148-TIFY11D/JAZ12-
CC COI1A complex. {ECO:0000269|PubMed:21332845}.
CC -!- SUBUNIT: Interacts with TIFY10A/JAZ6, TIFY10B/JAZ7, TIFY11A/JAZ9,
CC TIFY11C/JAZ11, and TIFY11D/JAZ12. {ECO:0000269|PubMed:21332845}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
CC -!- INDUCTION: By abscisic acid (ABA), methyl jasmonate (MeJA), drought,
CC cold, salt and wounding. {ECO:0000269|PubMed:21332845}.
CC -!- MISCELLANEOUS: Plants over-expressing BHLH148 display drought
CC tolerance. {ECO:0000269|PubMed:21332845}.
CC -!- SIMILARITY: Belongs to the bHLH protein family.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; HQ858871; ADX60283.1; -; mRNA.
DR EMBL; AC096855; AAR87309.1; -; Genomic_DNA.
DR EMBL; DP000009; ABF98794.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF13135.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS86307.1; -; Genomic_DNA.
DR EMBL; AK071734; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015631231.1; XM_015775745.1.
DR AlphaFoldDB; Q75KV9; -.
DR SMR; Q75KV9; -.
DR STRING; 4530.OS03T0741100-01; -.
DR PaxDb; Q75KV9; -.
DR PRIDE; Q75KV9; -.
DR EnsemblPlants; Os03t0741100-01; Os03t0741100-01; Os03g0741100.
DR GeneID; 4334060; -.
DR Gramene; Os03t0741100-01; Os03t0741100-01; Os03g0741100.
DR KEGG; osa:4334060; -.
DR eggNOG; ENOG502S1P8; Eukaryota.
DR HOGENOM; CLU_078911_0_0_1; -.
DR InParanoid; Q75KV9; -.
DR OMA; CHVLNER; -.
DR OrthoDB; 1242471at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IC:Gramene.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IC:Gramene.
DR GO; GO:0009414; P:response to water deprivation; IMP:UniProtKB.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR044658; bHLH92/bHLH041-like.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR PANTHER; PTHR46665; PTHR46665; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Stress response; Transcription;
KW Transcription regulation.
FT CHAIN 1..299
FT /note="Transcription factor BHLH148"
FT /id="PRO_0000434864"
FT DOMAIN 127..176
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 90..127
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 127..140
FT /note="Basic motif; degenerate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 141..176
FT /note="Helix-loop-helix motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 273..299
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 110..127
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 285..299
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 159
FT /note="K -> E (in Ref. 6; AK071734 and 1; ADX60283)"
FT /evidence="ECO:0000305"
FT CONFLICT 229
FT /note="G -> S (in Ref. 6; AK071734 and 1; ADX60283)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 299 AA; 32908 MW; BC06B8FAD2BCCA2C CRC64;
MQMESYYGAF HADEAAFFFP HHVPASPELP FGLIASPEPE PEPEQAAAEA RQSAFQEYGG
AVHAGAPAAA GAVTTGGTNI HRRVMDVLGR MGGGGGGGEK GEGEEMEEEE EVPQRRRRGQ
GADVESSRGF RHMMRERQRR EKLSQSYADL YAMVSSRSKG DKNSIVQSAA IYIHELKVAR
DQLQRRNEEL KAQIMGHDEQ QPCVTVQFEV DEPSSSIDSM IAALRRLKGM SVKARGIRSS
MSGNRLWTEM NVETTIAACE VEKAVEEALK EVERNQPDSD APFPGSKGWT QTSHVQNVF
