BH154_ARATH
ID BH154_ARATH Reviewed; 153 AA.
AC Q7XJU1; Q6NPG5; Q9SKC7;
DT 12-APR-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 132.
DE RecName: Full=Transcription factor bHLH154;
DE AltName: Full=BHLH transcription factor beta;
DE Short=bHLH beta {ECO:0000312|EMBL:CAE09168.1};
DE AltName: Full=Basic helix-loop-helix protein 154;
DE Short=AtbHLH154 {ECO:0000303|PubMed:14600211};
DE Short=bHLH 154;
DE AltName: Full=bHLH transcription factor bHLH154;
GN Name=BHLH154 {ECO:0000303|PubMed:14600211};
GN OrderedLocusNames=At2g31730 {ECO:0000312|Araport:AT2G31730};
GN ORFNames=F20M17.23 {ECO:0000312|EMBL:AAD32299.1},
GN T9H9.27 {ECO:0000312|EMBL:AAM15379.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, AND NOMENCLATURE.
RX PubMed=14600211; DOI=10.1105/tpc.151140;
RA Bailey P.C., Martin C., Toledo-Ortiz G., Quail P.H., Huq E., Heim M.A.,
RA Jakoby M., Werber M., Weisshaar B.;
RT "Update on the basic helix-loop-helix transcription factor gene family in
RT Arabidopsis thaliana.";
RL Plant Cell 15:2497-2502(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 25-153.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- INTERACTION:
CC Q7XJU1; Q93Y00: BHLH7; NbExp=3; IntAct=EBI-15195083, EBI-4442198;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
CC -!- SIMILARITY: Belongs to the bHLH protein family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD32299.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAM15379.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AJ576041; CAE09168.1; -; mRNA.
DR EMBL; AC006533; AAD32299.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC007071; AAM15379.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC08578.1; -; Genomic_DNA.
DR EMBL; CP002685; ANM63286.1; -; Genomic_DNA.
DR EMBL; BT010911; AAR24689.1; -; mRNA.
DR EMBL; BT010959; AAR24737.1; -; mRNA.
DR PIR; D84724; D84724.
DR RefSeq; NP_001325383.1; NM_001336345.1.
DR RefSeq; NP_180732.3; NM_128731.5.
DR AlphaFoldDB; Q7XJU1; -.
DR SMR; Q7XJU1; -.
DR IntAct; Q7XJU1; 19.
DR STRING; 3702.AT2G31730.1; -.
DR PaxDb; Q7XJU1; -.
DR PRIDE; Q7XJU1; -.
DR ProteomicsDB; 240393; -.
DR DNASU; 817730; -.
DR EnsemblPlants; AT2G31730.1; AT2G31730.1; AT2G31730.
DR EnsemblPlants; AT2G31730.2; AT2G31730.2; AT2G31730.
DR GeneID; 817730; -.
DR Gramene; AT2G31730.1; AT2G31730.1; AT2G31730.
DR Gramene; AT2G31730.2; AT2G31730.2; AT2G31730.
DR KEGG; ath:AT2G31730; -.
DR Araport; AT2G31730; -.
DR TAIR; locus:2045263; AT2G31730.
DR eggNOG; ENOG502S1Y8; Eukaryota.
DR HOGENOM; CLU_041735_4_0_1; -.
DR InParanoid; Q7XJU1; -.
DR OMA; RDSAGMM; -.
DR OrthoDB; 1365098at2759; -.
DR PhylomeDB; Q7XJU1; -.
DR PRO; PR:Q7XJU1; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q7XJU1; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0009739; P:response to gibberellin; IEP:TAIR.
DR CDD; cd11393; bHLH_AtbHLH_like; 1.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR045239; bHLH95_bHLH.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..153
FT /note="Transcription factor bHLH154"
FT /id="PRO_0000439392"
FT DOMAIN 29..78
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
SQ SEQUENCE 153 AA; 17254 MW; 63E30DE46D00C948 CRC64;
MEYSRDSAEM MMETKRNVYS LEDNKIKRHK SSDLSFSSKE RKDKLAERIS ALQQLVSPYG
KTDTASVLLE GMQYIQFLQE QVKVLSAPYL QATPSTTEEE VEEYSLRSKG LCLVPLEYTS
EVAQTNGADI WAPVKTPTSS HAFNLSSSNS PFQ
