SKI34_ARATH
ID SKI34_ARATH Reviewed; 94 AA.
AC Q8GWU7;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Protein SKIP34;
DE AltName: Full=SKP1-interacting partner 34;
GN Name=SKIP34; OrderedLocusNames=At5g65495; ORFNames=K19O4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP INTERACTION WITH SPK1B/ASK2.
RX PubMed=12795696; DOI=10.1046/j.1365-313x.2003.01768.x;
RA Risseeuw E.P., Daskalchuk T.E., Banks T.W., Liu E., Cotelesage J.,
RA Hellmann H., Estelle M., Somers D.E., Crosby W.L.;
RT "Protein interaction analysis of SCF ubiquitin E3 ligase subunits from
RT Arabidopsis.";
RL Plant J. 34:753-767(2003).
CC -!- SUBUNIT: Interacts with SPK1B/ASK2. {ECO:0000269|PubMed:12795696}.
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DR EMBL; AB026638; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED98063.1; -; Genomic_DNA.
DR EMBL; AK118625; BAC43223.1; -; mRNA.
DR EMBL; BT004684; AAO42930.1; -; mRNA.
DR RefSeq; NP_850928.1; NM_180597.3.
DR AlphaFoldDB; Q8GWU7; -.
DR SMR; Q8GWU7; -.
DR BioGRID; 21917; 6.
DR IntAct; Q8GWU7; 8.
DR STRING; 3702.AT5G65495.1; -.
DR PaxDb; Q8GWU7; -.
DR PRIDE; Q8GWU7; -.
DR EnsemblPlants; AT5G65495.1; AT5G65495.1; AT5G65495.
DR GeneID; 836675; -.
DR Gramene; AT5G65495.1; AT5G65495.1; AT5G65495.
DR KEGG; ath:AT5G65495; -.
DR Araport; AT5G65495; -.
DR TAIR; locus:1005716821; AT5G65495.
DR eggNOG; ENOG502S8X3; Eukaryota.
DR HOGENOM; CLU_164338_0_0_1; -.
DR InParanoid; Q8GWU7; -.
DR OMA; NHEEEWR; -.
DR OrthoDB; 1642578at2759; -.
DR PRO; PR:Q8GWU7; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8GWU7; baseline and differential.
PE 1: Evidence at protein level;
KW Coiled coil; Reference proteome; Ubl conjugation pathway.
FT CHAIN 1..94
FT /note="Protein SKIP34"
FT /id="PRO_0000375235"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 23..61
FT /evidence="ECO:0000255"
SQ SEQUENCE 94 AA; 11222 MW; 2BA0F1998B97AA22 CRC64;
MCYGHNQSLS SRSSLRRRSH DGEDDSVVDD LRDRLAETEA RLRRARAREA ELSRRLEHMK
RFVSVMEIIE TFLERRFQEQ KDRIARLFSP VSTK