ID   SKI35_ARATH             Reviewed;         611 AA.
AC   Q9M1Y3;
DT   26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   25-MAY-2022, entry version 120.
DE   RecName: Full=Ankyrin repeat protein SKIP35;
DE   AltName: Full=SKP1-interacting partner 35;
GN   Name=SKIP35; OrderedLocusNames=At3g59910; ORFNames=F24G16.180;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130713; DOI=10.1038/35048706;
RA   Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA   Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA   Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA   Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA   Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA   Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA   Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA   Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA   Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA   Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA   Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA   de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA   Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA   Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA   Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA   Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA   Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA   Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA   Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA   Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA   Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA   Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT   "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL   Nature 408:820-822(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   INTERACTION WITH SKP1A/ASK1.
RX   PubMed=12795696; DOI=10.1046/j.1365-313x.2003.01768.x;
RA   Risseeuw E.P., Daskalchuk T.E., Banks T.W., Liu E., Cotelesage J.,
RA   Hellmann H., Estelle M., Somers D.E., Crosby W.L.;
RT   "Protein interaction analysis of SCF ubiquitin E3 ligase subunits from
RT   Arabidopsis.";
RL   Plant J. 34:753-767(2003).
CC   -!- SUBUNIT: Interacts with SKP1A/ASK1. {ECO:0000269|PubMed:12795696}.
CC   -!- INTERACTION:
CC       Q9M1Y3; Q84MB2: TIFY8; NbExp=3; IntAct=EBI-604645, EBI-4426557;
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DR   EMBL; AL138647; CAB75810.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE79984.1; -; Genomic_DNA.
DR   EMBL; CP002686; ANM65034.1; -; Genomic_DNA.
DR   EMBL; AY099865; AAM20716.1; -; mRNA.
DR   EMBL; BT008381; AAP37740.1; -; mRNA.
DR   PIR; T47815; T47815.
DR   RefSeq; NP_001327032.1; NM_001340005.1.
DR   RefSeq; NP_191550.1; NM_115854.5.
DR   AlphaFoldDB; Q9M1Y3; -.
DR   SMR; Q9M1Y3; -.
DR   BioGRID; 10475; 2.
DR   IntAct; Q9M1Y3; 3.
DR   STRING; 3702.AT3G59910.1; -.
DR   iPTMnet; Q9M1Y3; -.
DR   PaxDb; Q9M1Y3; -.
DR   PRIDE; Q9M1Y3; -.
DR   EnsemblPlants; AT3G59910.1; AT3G59910.1; AT3G59910.
DR   EnsemblPlants; AT3G59910.2; AT3G59910.2; AT3G59910.
DR   GeneID; 825161; -.
DR   Gramene; AT3G59910.1; AT3G59910.1; AT3G59910.
DR   Gramene; AT3G59910.2; AT3G59910.2; AT3G59910.
DR   KEGG; ath:AT3G59910; -.
DR   Araport; AT3G59910; -.
DR   TAIR; locus:2080512; AT3G59910.
DR   eggNOG; ENOG502QRVR; Eukaryota.
DR   HOGENOM; CLU_021673_0_0_1; -.
DR   InParanoid; Q9M1Y3; -.
DR   OMA; RINSSNW; -.
DR   OrthoDB; 449420at2759; -.
DR   PhylomeDB; Q9M1Y3; -.
DR   PRO; PR:Q9M1Y3; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q9M1Y3; baseline and differential.
DR   Genevisible; Q9M1Y3; AT.
DR   Gene3D; 1.25.40.20; -; 1.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR044956; SKIP35.
DR   PANTHER; PTHR36024; PTHR36024; 1.
DR   SUPFAM; SSF48403; SSF48403; 1.
PE   1: Evidence at protein level;
KW   ANK repeat; Reference proteome; Repeat.
FT   CHAIN           1..611
FT                   /note="Ankyrin repeat protein SKIP35"
FT                   /id="PRO_0000375234"
FT   REPEAT          292..322
FT                   /note="ANK 1"
FT   REPEAT          323..353
FT                   /note="ANK 2"
FT   REPEAT          356..384
FT                   /note="ANK 3"
FT   REPEAT          385..414
FT                   /note="ANK 4"
FT   REPEAT          416..442
FT                   /note="ANK 5"
FT   REPEAT          445..478
FT                   /note="ANK 6"
SQ   SEQUENCE   611 AA;  67059 MW;  20117DA54E6B4DC2 CRC64;
     MEKEGVCDTI NLSDQMYPDE PFCSEMKTET IASSQKFEGG EGSKVVFSRE APLIGKDSAG
     TNSGECCGCS AKKLNFKGDD DLVEKENIEQ QKKLNRQERI ELGRLFQGAV TSLDWELAER
     LIQLADPQTL NDLLCVGLDS VWFLSTKPEF QGITGLIKKI ICHGAHDFTR ATLRTSFLAS
     CVSACQSRTM SLSDTVTVMA QRLHERLQEC NGDEILKAEA GAKVQKFTEW ALKCIGFHSR
     CQGAKDRVSQ NSAAEIELQL SAFKMFLDLA GNHLSGRDFT EAFDAACFPL TLFSNSFDPG
     WASGMSATVI QGLLGMLVEG GADNVNQCFL EASRFGSTEL VRVLLQIAQR NSLDVDVDLA
     LGFASHYCKI GTMKCLVEEG NAIAFLGPLM RAAERGCMQV VQWFVKRGCR DMELCLALTA
     ATSSCQVEVA AYLLPRVPPP VLTALSIEIL KAAGERSGGS LQGVEFLLKS DFLGDSTATY
     SVADSIARSS EDESVPSDLK SFLQEHWSES AFEKGMRESH DDFMNFMRVL KKGESAISLR
     DLPAPLRVAI AYMPLYRECM KADGRLLSQR LRGQLVEAVR QLQGCAVAVV EVSQTRNLMA
     VLEHHLTAIF D