SL1_ORYSJ
ID SL1_ORYSJ Reviewed; 263 AA.
AC Q9LG97; A0A0P0UY19; C7IXI9;
DT 03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Zinc finger protein STAMENLESS 1;
DE AltName: Full=OsJAG;
DE AltName: Full=Zinc finger protein OPEN BEAK;
GN Name=SL1; Synonyms=OBP; OrderedLocusNames=Os01g0129200, LOC_Os01g03840;
GN ORFNames=P0408F06.18;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SUBCELLULAR LOCATION, TISSUE
RP SPECIFICITY, AND DISRUPTION PHENOTYPE.
RC STRAIN=cv. Nipponbare;
RX PubMed=19207212; DOI=10.1111/j.1365-313x.2009.03823.x;
RA Horigome A., Nagasawa N., Ikeda K., Ito M., Itoh J., Nagato Y.;
RT "Rice OPEN BEAK is a negative regulator of class 1 knox genes and a
RT positive regulator of class B floral homeotic gene.";
RL Plant J. 58:724-736(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SUBCELLULAR LOCATION, TISSUE
RP SPECIFICITY, AND DISRUPTION PHENOTYPE.
RC STRAIN=cv. Jingxi 17;
RX PubMed=19453444; DOI=10.1111/j.1365-313x.2009.03913.x;
RA Xiao H., Tang J., Li Y., Wang W., Li X., Jin L., Xie R., Luo H., Zhao X.,
RA Meng Z., He G., Zhu L.;
RT "STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral
RT organ identity in rice.";
RL Plant J. 59:789-801(2009).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- FUNCTION: Regulates floral organ identity and cell proliferation in the
CC inner floral whorls. Probably specifies the identities of lodicule and
CC stamen through positive regulation of MADS16 expression. May contribute
CC to morphogenesis by suppressing OSH1 expression in the lateral organs.
CC {ECO:0000269|PubMed:19207212, ECO:0000269|PubMed:19453444}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:19207212,
CC ECO:0000269|PubMed:19453444}.
CC -!- TISSUE SPECIFICITY: Expressed in leaf primordia, inflorescence
CC meristem, rachis branch meristems, floral meristem and floral organ
CC primordia. {ECO:0000269|PubMed:19207212, ECO:0000269|PubMed:19453444}.
CC -!- DISRUPTION PHENOTYPE: Male sterility. Increased number of inflorescence
CC branches, modified floral organ identities, flowers with varied numbers
CC of inner floral organs and amorphous tissues without floral organ
CC identity in whorls 3 and 4. Malformation of leaf blades until the
CC fourth-leaf stage. {ECO:0000269|PubMed:19207212,
CC ECO:0000269|PubMed:19453444}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAH90889.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB297789; BAH09094.1; -; mRNA.
DR EMBL; EU443151; ACA48519.1; -; mRNA.
DR EMBL; AP002538; BAB03385.1; -; Genomic_DNA.
DR EMBL; AP008207; BAH90889.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014957; BAS70200.1; -; Genomic_DNA.
DR RefSeq; XP_015647214.1; XM_015791728.1.
DR AlphaFoldDB; Q9LG97; -.
DR STRING; 4530.OS01T0129200-01; -.
DR iPTMnet; Q9LG97; -.
DR PaxDb; Q9LG97; -.
DR PRIDE; Q9LG97; -.
DR EnsemblPlants; Os01t0129200-01; Os01t0129200-01; Os01g0129200.
DR GeneID; 9269702; -.
DR Gramene; Os01t0129200-01; Os01t0129200-01; Os01g0129200.
DR KEGG; osa:9269702; -.
DR eggNOG; ENOG502QUI4; Eukaryota.
DR HOGENOM; CLU_108250_0_0_1; -.
DR InParanoid; Q9LG97; -.
DR OMA; HHYLYTT; -.
DR OrthoDB; 1361439at2759; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0048437; P:floral organ development; IMP:UniProtKB.
DR GO; GO:0008285; P:negative regulation of cell population proliferation; IMP:UniProtKB.
DR GO; GO:0010094; P:specification of carpel identity; IMP:UniProtKB.
DR GO; GO:0010097; P:specification of stamen identity; IMP:UniProtKB.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SUPFAM; SSF57667; SSF57667; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Differentiation; Metal-binding; Nucleus;
KW Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..263
FT /note="Zinc finger protein STAMENLESS 1"
FT /id="PRO_0000407990"
FT ZN_FING 58..80
FT /note="C2H2-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 21..43
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 263 AA; 27568 MW; 8E1B99E7603F7F48 CRC64;
MNSSRRQEGS PLDLNNLPDE FGKQTVESST TTAASSAEAS RVTKKKSNGG KDEAGKVYEC
RFCSLKFCKS QALGGHMNRH RQERETETLN RARQLVFGND SLAAVGAQLN FRDVNMGGGG
AAAPPPTMQM GGGGFRGGGV GGDPCIPLRP VQPRLSPPQP PPYHHYLYTT TAPPSALHPM
SYPATYPAPP RHQQPAAVGD YVIGHAVSAG DALVAPPPPP HRASFSCFGA PLAAPPANVQ
PDNGNCNCSF GCGHSNRNVN AAS
