SL9A_PROFL
ID SL9A_PROFL Reviewed; 152 AA.
AC P23806; Q91246; Q98UJ0;
DT 01-NOV-1991, integrated into UniProtKB/Swiss-Prot.
DT 15-JUL-1998, sequence version 2.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Snaclec coagulation factor IX/factor X-binding protein subunit A;
DE Short=IX/X-bp subunit A;
DE Flags: Precursor;
OS Protobothrops flavoviridis (Habu) (Trimeresurus flavoviridis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera;
OC Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops.
OX NCBI_TaxID=88087;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Venom gland;
RX PubMed=8645314; DOI=10.1006/bbrc.1996.0414;
RA Matsuzaki R., Yoshihara E., Yamada M., Shima K., Atoda H., Morita T.;
RT "cDNA cloning of IX/X-BP, a heterogeneous two-chain anticoagulant protein
RT from snake venom.";
RL Biochem. Biophys. Res. Commun. 220:382-387(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 7-152.
RC TISSUE=Venom gland;
RX PubMed=12175618; DOI=10.1016/s0041-0101(01)00289-6;
RA Tani A., Ogawa T., Nose T., Nikandrov N.N., Deshimaru M., Chijiwa T.,
RA Chang C.C., Fukumaki Y., Ohno M.;
RT "Characterization, primary structure and molecular evolution of
RT anticoagulant protein from Agkistrodon actus venom.";
RL Toxicon 40:803-813(2002).
RN [3]
RP PROTEIN SEQUENCE OF 24-152.
RC TISSUE=Venom;
RX PubMed=1831197; DOI=10.1016/s0021-9258(18)98563-7;
RA Atoda H., Hyuga M., Morita T.;
RT "The primary structure of coagulation factor IX/factor X-binding protein
RT isolated from the venom of Trimeresurus flavoviridis. Homology with
RT asialoglycoprotein receptors, proteoglycan core protein, tetranectin, and
RT lymphocyte Fc epsilon receptor for immunoglobulin E.";
RL J. Biol. Chem. 266:14903-14911(1991).
RN [4]
RP FUNCTION.
RX PubMed=2613688; DOI=10.1093/oxfordjournals.jbchem.a122935;
RA Atoda H., Morita T.;
RT "A novel blood coagulation factor IX/factor X-binding protein with
RT anticoagulant activity from the venom of Trimeresurus flavoviridis (Habu
RT snake): isolation and characterization.";
RL J. Biochem. 106:808-813(1989).
RN [5]
RP FUNCTION.
RX PubMed=7925387; DOI=10.1111/j.1432-1033.1994.t01-1-00703.x;
RA Atoda H., Yoshida N., Ishikawa M., Morita T.;
RT "Binding properties of the coagulation factor IX/factor X-binding protein
RT isolated from the venom of Trimeresurus flavoviridis.";
RL Eur. J. Biochem. 224:703-708(1994).
RN [6]
RP X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) OF 24-152, METAL-BINDING SITES, AND
RP DISULFIDE BONDS.
RX PubMed=9187649; DOI=10.1038/nsb0697-438;
RA Mizuno H., Fujimoto Z., Koizumi M., Kano H., Atoda H., Morita T.;
RT "Structure of coagulation factors IX/X-binding protein, a heterodimer of C-
RT type lectin domains.";
RL Nat. Struct. Biol. 4:438-441(1997).
CC -!- FUNCTION: Anticoagulant protein which binds to the gamma-
CC carboxyglutamic acid-domain regions of factors IX (F9) and factor X
CC (F10) in the presence of calcium with a 1 to 1 stoichiometry.
CC {ECO:0000269|PubMed:2613688, ECO:0000269|PubMed:7925387}.
CC -!- SUBUNIT: Heterodimer of subunits A and B; disulfide-linked.
CC {ECO:0000269|PubMed:9187649}.
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- TISSUE SPECIFICITY: Expressed by the venom gland.
CC -!- MISCELLANEOUS: Calcium is required for ligand binding.
CC -!- SIMILARITY: Belongs to the snaclec family. {ECO:0000305}.
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DR EMBL; D83331; BAA11887.1; -; mRNA.
DR EMBL; AB046491; BAB21452.1; -; mRNA.
DR PIR; JC4690; JC4690.
DR PDB; 1IXX; X-ray; 2.50 A; A/C/E=24-152.
DR PDBsum; 1IXX; -.
DR AlphaFoldDB; P23806; -.
DR SMR; P23806; -.
DR EvolutionaryTrace; P23806; -.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0090729; F:toxin activity; IEA:UniProtKB-KW.
DR Gene3D; 3.10.100.10; -; 1.
DR InterPro; IPR001304; C-type_lectin-like.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR018378; C-type_lectin_CS.
DR InterPro; IPR016187; CTDL_fold.
DR Pfam; PF00059; Lectin_C; 1.
DR SMART; SM00034; CLECT; 1.
DR SUPFAM; SSF56436; SSF56436; 1.
DR PROSITE; PS00615; C_TYPE_LECTIN_1; 1.
DR PROSITE; PS50041; C_TYPE_LECTIN_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Blood coagulation cascade inhibiting toxin; Calcium;
KW Direct protein sequencing; Disulfide bond; Hemostasis impairing toxin;
KW Metal-binding; Secreted; Signal; Toxin.
FT SIGNAL 1..23
FT /evidence="ECO:0000269|PubMed:1831197"
FT CHAIN 24..152
FT /note="Snaclec coagulation factor IX/factor X-binding
FT protein subunit A"
FT /id="PRO_0000017530"
FT DOMAIN 24..152
FT /note="C-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
FT BINDING 64
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT BINDING 66
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT BINDING 70
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT BINDING 151
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT DISULFID 25..36
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040,
FT ECO:0000269|PubMed:9187649"
FT DISULFID 53..150
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040,
FT ECO:0000269|PubMed:9187649"
FT DISULFID 102
FT /note="Interchain (with C-98 in subunit B)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040,
FT ECO:0000269|PubMed:9187649"
FT DISULFID 125..142
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040,
FT ECO:0000269|PubMed:9187649"
FT STRAND 36..44
FT /evidence="ECO:0007829|PDB:1IXX"
FT HELIX 46..56
FT /evidence="ECO:0007829|PDB:1IXX"
FT HELIX 68..81
FT /evidence="ECO:0007829|PDB:1IXX"
FT STRAND 89..95
FT /evidence="ECO:0007829|PDB:1IXX"
FT HELIX 119..121
FT /evidence="ECO:0007829|PDB:1IXX"
FT STRAND 125..128
FT /evidence="ECO:0007829|PDB:1IXX"
FT HELIX 130..132
FT /evidence="ECO:0007829|PDB:1IXX"
FT STRAND 136..140
FT /evidence="ECO:0007829|PDB:1IXX"
FT STRAND 146..151
FT /evidence="ECO:0007829|PDB:1IXX"
SQ SEQUENCE 152 AA; 17213 MW; FB3DDD2369009263 CRC64;
MGRFIFMSFG LLVVAASLRG TGADCLSGWS SYEGHCYKAF EKYKTWEDAE RVCTEQAKGA
HLVSIESSGE ADFVAQLVTQ NMKRLDFYIW IGLRVQGKVK QCNSEWSDGS SVSYENWIEA
ESKTCLGLEK ETDFRKWVNI YCGQQNPFVC EA