SLE2_SOYBN
ID SLE2_SOYBN Reviewed; 105 AA.
AC I1JLC8; P93165;
DT 26-NOV-2014, integrated into UniProtKB/Swiss-Prot.
DT 13-JUN-2012, sequence version 1.
DT 03-AUG-2022, entry version 47.
DE RecName: Full=Protein SLE2 {ECO:0000303|Ref.3};
DE AltName: Full=Em protein {ECO:0000303|Ref.2};
DE AltName: Full=Protein Glycine max physiologically mature 11 {ECO:0000303|PubMed:23017910};
DE AltName: Full=Protein GmD-19 {ECO:0000303|PubMed:11891239};
DE AltName: Full=Soybean group-1 late embryogenesis abundant protein 2 {ECO:0000303|Ref.3};
DE AltName: Full=Soybean group-1 lea protein 2 {ECO:0000303|Ref.3};
DE Short=Sle2 {ECO:0000303|Ref.3};
GN Name=SLE2;
GN Synonyms=GmD-19 {ECO:0000303|PubMed:11891239},
GN GmPM11 {ECO:0000303|PubMed:23017910}; OrderedLocusNames=Glyma03g07470.1;
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000312|Proteomes:UP000008827};
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Essex; TISSUE=Seed;
RA Burns W.C., Maitra N., Cushman J.C.;
RT "Isolation and characterization of a cDNA encoding a Group I LEA protein
RT (Accession No. U66317) from soybean 1.";
RL (er) Plant Gene Register PGR97-016(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Shi-shi; TISSUE=Cotyledon;
RA Hsu T.F., Tsai F.Y., Hsing Y.I., Chow T.Y.;
RT "Glycine max mRNA for Em protein.";
RL Submitted (MAY-1997) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], TISSUE SPECIFICITY, DEVELOPMENTAL STAGE,
RP AND INDUCTION BY DROUGHT.
RC STRAIN=cv. Williams 82;
RA Calvo E.S., Wurtle E.S., Shoemaker R.C.;
RT "Cloning, mapping, and analyses of expression of the Em-like gene family in
RT soybean [Glycine max (L). Merr.].";
RL Theor. Appl. Genet. 94:957-967(1997).
RN [4]
RP STRUCTURE.
RX PubMed=11891239; DOI=10.1104/pp.010521;
RA Soulages J.L., Kim K., Walters C., Cushman J.C.;
RT "Temperature-induced extended helix/random coil transitions in a group 1
RT late embryogenesis-abundant protein from soybean.";
RL Plant Physiol. 128:822-832(2002).
RN [5]
RP FUNCTION.
RX PubMed=23017910; DOI=10.1016/j.plantsci.2012.07.012;
RA Shih M.D., Hsieh T.Y., Jian W.T., Wu M.T., Yang S.J., Hoekstra F.A.,
RA Hsing Y.I.;
RT "Functional studies of soybean (Glycine max L.) seed LEA proteins GmPM6,
RT GmPM11, and GmPM30 by CD and FTIR spectroscopy.";
RL Plant Sci. 196:152-159(2012).
CC -!- FUNCTION: Late embryogenesis abundant (LEA) protein interacting with
CC non-reducing sugars and phospholipids. {ECO:0000269|PubMed:23017910}.
CC -!- TISSUE SPECIFICITY: In seeds, expressed in the embryonic axis and in
CC the cotyledons. Not detected in leaves, stems or roots.
CC {ECO:0000269|Ref.3}.
CC -!- DEVELOPMENTAL STAGE: Expressed during seed development, from 70 days
CC after fertilization (daf) until full maturation and drying at 105 daf.
CC Decreases rapidly after imbibition. {ECO:0000269|Ref.3}.
CC -!- INDUCTION: Down-regulated by drought in 30 days after fertilization
CC seeds. Not regulated by drought in leaves, cotyledons, hypocotyls and
CC roots. {ECO:0000269|Ref.3}.
CC -!- MISCELLANEOUS: Belongs to the 'natively unfolded proteins'. The drying
CC rate significantly affected the structure of the protein.
CC {ECO:0000269|PubMed:11891239, ECO:0000269|PubMed:23017910}.
CC -!- SIMILARITY: Belongs to the small hydrophilic plant seed protein family.
CC {ECO:0000305}.
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DR EMBL; U66317; AAB68027.1; -; mRNA.
DR EMBL; AF004805; AAB71224.1; -; mRNA.
DR PIR; T07087; T07087.
DR RefSeq; NP_001237287.1; NM_001250358.1.
DR AlphaFoldDB; I1JLC8; -.
DR STRING; 3847.GLYMA03G07470.1; -.
DR PRIDE; I1JLC8; -.
DR EnsemblPlants; KRH65706; KRH65706; GLYMA_03G056000.
DR GeneID; 547493; -.
DR Gramene; KRH65706; KRH65706; GLYMA_03G056000.
DR KEGG; gmx:547493; -.
DR eggNOG; ENOG502S40U; Eukaryota.
DR HOGENOM; CLU_144393_0_0_1; -.
DR InParanoid; I1JLC8; -.
DR OMA; RACAHYH; -.
DR OrthoDB; 1598665at2759; -.
DR Proteomes; UP000008827; Chromosome 3.
DR GO; GO:0050821; P:protein stabilization; IDA:CAFA.
DR GO; GO:0009737; P:response to abscisic acid; IBA:GO_Central.
DR DisProt; DP01036; -.
DR InterPro; IPR038956; LEA_5.
DR InterPro; IPR022377; Sm_Hydphi_plant_seed_CS.
DR InterPro; IPR000389; Small_hydrophilic_seed_prot.
DR PANTHER; PTHR34671; PTHR34671; 1.
DR Pfam; PF00477; LEA_5; 1.
DR PROSITE; PS00431; SMALL_HYDR_PLANT_SEED; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..105
FT /note="Protein SLE2"
FT /id="PRO_0000431230"
FT REGION 1..105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 68..86
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 70
FT /note="E -> D (in Ref. 1; AAB68027 and 2; AAB71224)"
SQ SEQUENCE 105 AA; 11505 MW; 16D42F1CC20E97AE CRC64;
MASRQNNKQE LDERARQGET VVPGGTGGKS LEAQQHLAEG RSKGGQTRKE QLGTEGYQEM
GRKGGLSTVE KSGEERAQEE GIGIDESKFR TGNNKNQNQN EDQDK
