BIC1B_XENLA
ID BIC1B_XENLA Reviewed; 970 AA.
AC Q5U4T7;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=Protein bicaudal C homolog 1-B;
DE Short=Bic-C-B;
GN Name=bicc1-b;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Oocyte;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Putative RNA-binding protein. May be involved in regulating
CC gene expression during embryonic development. Seems to be involved in
CC endoderm formation. Ectopic expression results in endoderm formation in
CC the absence of mesoderm induction (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the BicC family. {ECO:0000305}.
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DR EMBL; BC084957; AAH84957.1; -; mRNA.
DR RefSeq; NP_001088559.1; NM_001095090.1.
DR AlphaFoldDB; Q5U4T7; -.
DR SMR; Q5U4T7; -.
DR PRIDE; Q5U4T7; -.
DR DNASU; 495436; -.
DR GeneID; 495436; -.
DR KEGG; xla:495436; -.
DR CTD; 495436; -.
DR Xenbase; XB-GENE-865790; bicc1.L.
DR OrthoDB; 201055at2759; -.
DR Proteomes; UP000186698; Chromosome 7L.
DR Bgee; 495436; Expressed in egg cell and 17 other tissues.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd09520; SAM_BICC1; 1.
DR Gene3D; 1.10.150.50; -; 1.
DR Gene3D; 3.30.1370.10; -; 1.
DR InterPro; IPR037974; BICC1_SAM_dom.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR001660; SAM.
DR InterPro; IPR013761; SAM/pointed_sf.
DR Pfam; PF00013; KH_1; 2.
DR Pfam; PF00536; SAM_1; 1.
DR SMART; SM00322; KH; 3.
DR SMART; SM00454; SAM; 1.
DR SUPFAM; SSF47769; SSF47769; 1.
DR SUPFAM; SSF54791; SSF54791; 3.
DR PROSITE; PS50084; KH_TYPE_1; 2.
DR PROSITE; PS50105; SAM_DOMAIN; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Reference proteome; Repeat; RNA-binding.
FT CHAIN 1..970
FT /note="Protein bicaudal C homolog 1-B"
FT /id="PRO_0000267717"
FT DOMAIN 130..197
FT /note="KH 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00117"
FT DOMAIN 282..346
FT /note="KH 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00117"
FT DOMAIN 869..932
FT /note="SAM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00184"
FT REGION 1..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 596..638
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 677..696
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 773..841
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..24
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 36..50
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 780..812
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 970 AA; 105728 MW; 6260BC64665458DC CRC64;
MAAQCGGYMN QSDPGSNSER SADSPLPGSE DDSPGSAAPH DPEWREERFR VDRKKLETML
QAAAEGKGKS GEDFFQKIME ETNTQIAWPS KLKIGAKSKK DPHIKVSGKK ENVKEAKERI
MSVLDTKSNR VTLKMDVSHT EHSHVIGKGG NNIKKVMEET GCHIHFPDSN RNNQAEKSNQ
VSIAGQPAGV ESARVRIREL LPLVLMFELP IAGILQPIPD PNSPTIQQIS QTYNITVSFK
QRSRVYGATV IVRGSQNNTS AVKEGTAMLL EHLAGSLASA IPVSTQLDIA AQHHLFMMGR
NGCNIKHIMQ RTGAQIHFPD PNNPLKKSTV YLQGTIESVC LARQYLMGCL PLVLMFDMKE
EIEVEPQCIT QLMEQLDVFI SIKPKPKQPS KSVIVKSVER NALNMYEARK CLLGLDSSGV
TITNQSTISC PIPMNCHGLD ILAAGLGLSG LGLLGPNTLS VNSTTAQNSL LNALNSSVSP
LHSPSSAAPS PTLWATSLAN TSNATGFPAI PHLMIPSAAQ ATLTNFLLSG VPNYGQNTPS
PPPGLTPVDV HMNGLHSECK KVTSVLNGHV KPTNMKYGTI SSSSLGDKVL NTNLAEASRQ
SNNHSSAEEV NSKTDSEGCN DAFVEVGMPR SPSHSANTKD LKQMLNSTKA PCPTRQTVKL
LHGTKNSHLH TAERLLSDSE MSPTEGPMTD KKAPGSERAA ERAAAQHNCE MARFTSQSAY
GNMQAYDYEQ KKLLATKAML KKPVVTEVRT PTNTWSGLGF SKSMPAETIK ELRRANHVPY
KPTMSTTYEN SPMSLSRSNS REQLGNGSDS DNWRERNGID SSHNDYSSSI GSPKRKQNKS
AEHYLSSSNY MDCISSLTGS NGCNLNSSFK GSDLPELFSK LGLGKYTDIF QQQEIDLQTF
LTLTDQDLKE LGITTFGARR KMLLAISELN KNRRKLFEPT NIRSSFLEGG ASGRLPRQYH
TDIASVSGRW