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SLN11_HUMAN
ID   SLN11_HUMAN             Reviewed;         901 AA.
AC   Q7Z7L1; E1P643; Q8N3S8; Q8N762; Q8TEE0;
DT   03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT   30-NOV-2010, sequence version 2.
DT   03-AUG-2022, entry version 151.
DE   RecName: Full=Schlafen family member 11 {ECO:0000305};
DE            EC=3.6.-.- {ECO:0000269|PubMed:29395061};
GN   Name=SLFN11 {ECO:0000312|HGNC:HGNC:26633};
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANTS PHE-121 AND ASP-301.
RC   TISSUE=Spleen;
RX   PubMed=14702039; DOI=10.1038/ng1285;
RA   Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA   Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA   Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA   Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA   Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA   Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA   Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA   Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA   Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA   Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA   Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA   Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA   Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA   Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA   Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA   Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA   Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA   Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA   Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA   Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA   Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA   Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA   Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA   Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA   Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA   Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA   Isogai T., Sugano S.;
RT   "Complete sequencing and characterization of 21,243 full-length human
RT   cDNAs.";
RL   Nat. Genet. 36:40-45(2004).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT ASP-301.
RC   TISSUE=Skeletal muscle;
RX   PubMed=17974005; DOI=10.1186/1471-2164-8-399;
RA   Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U.,
RA   Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D.,
RA   Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A.,
RA   Wiemann S., Schupp I.;
RT   "The full-ORF clone resource of the German cDNA consortium.";
RL   BMC Genomics 8:399-399(2007).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=16625196; DOI=10.1038/nature04689;
RA   Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R.,
RA   Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A.,
RA   Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J.,
RA   Chang J.L., Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J.,
RA   DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S.,
RA   Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E.,
RA   Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K.,
RA   LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J.,
RA   Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A.,
RA   Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K.,
RA   Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D.,
RA   Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A.,
RA   Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.;
RT   "DNA sequence of human chromosome 17 and analysis of rearrangement in the
RT   human lineage.";
RL   Nature 440:1045-1049(2006).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND VARIANT ASP-301.
RA   Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M.,
RA   Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J.,
RA   Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S.,
RA   Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H.,
RA   Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K.,
RA   Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D.,
RA   Hunkapiller M.W., Myers E.W., Venter J.C.;
RL   Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT ASP-301.
RC   TISSUE=Skin;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [6]
RP   INDUCTION.
RX   PubMed=20956525; DOI=10.1074/jbc.m110.151076;
RA   Katsoulidis E., Mavrommatis E., Woodard J., Shields M.A., Sassano A.,
RA   Carayol N., Sawicki K.T., Munshi H.G., Platanias L.C.;
RT   "Role of interferon {alpha} (IFN{alpha})-inducible Schlafen-5 in regulation
RT   of anchorage-independent growth and invasion of malignant melanoma cells.";
RL   J. Biol. Chem. 285:40333-40341(2010).
RN   [7]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA   Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T.,
RA   Bennett K.L., Superti-Furga G., Colinge J.;
RT   "Initial characterization of the human central proteome.";
RL   BMC Syst. Biol. 5:17-17(2011).
RN   [8]
RP   FUNCTION, TRNA-BINDING, AND INDUCTION.
RX   PubMed=23000900; DOI=10.1038/nature11433;
RA   Li M., Kao E., Gao X., Sandig H., Limmer K., Pavon-Eternod M., Jones T.E.,
RA   Landry S., Pan T., Weitzman M.D., David M.;
RT   "Codon-usage-based inhibition of HIV protein synthesis by human schlafen
RT   11.";
RL   Nature 491:125-128(2012).
RN   [9]
RP   FUNCTION, SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
RX   PubMed=22927417; DOI=10.1073/pnas.1205943109;
RA   Zoppoli G., Regairaz M., Leo E., Reinhold W.C., Varma S., Ballestrero A.,
RA   Doroshow J.H., Pommier Y.;
RT   "Putative DNA/RNA helicase Schlafen-11 (SLFN11) sensitizes cancer cells to
RT   DNA-damaging agents.";
RL   Proc. Natl. Acad. Sci. U.S.A. 109:15030-15035(2012).
RN   [10]
RP   FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH RPA1, AND MUTAGENESIS OF
RP   LYS-605 AND ASP-668.
RX   PubMed=26658330; DOI=10.15252/embr.201540964;
RA   Mu Y., Lou J., Srivastava M., Zhao B., Feng X.H., Liu T., Chen J.,
RA   Huang J.;
RT   "SLFN11 inhibits checkpoint maintenance and homologous recombination
RT   repair.";
RL   EMBO Rep. 17:94-109(2016).
RN   [11]
RP   INDUCTION, AND INTERACTION WITH DHX9.
RX   PubMed=26625211; DOI=10.18632/oncotarget.6413;
RA   Nogales V., Reinhold W.C., Varma S., Martinez-Cardus A., Moutinho C.,
RA   Moran S., Heyn H., Sebio A., Barnadas A., Pommier Y., Esteller M.;
RT   "Epigenetic inactivation of the putative DNA/RNA helicase SLFN11 in human
RT   cancer confers resistance to platinum drugs.";
RL   Oncotarget 7:3084-3097(2016).
RN   [12]
RP   INDUCTION.
RX   PubMed=28196596; DOI=10.1016/j.ccell.2017.01.006;
RA   Gardner E.E., Lok B.H., Schneeberger V.E., Desmeules P., Miles L.A.,
RA   Arnold P.K., Ni A., Khodos I., de Stanchina E., Nguyen T., Sage J.,
RA   Campbell J.E., Ribich S., Rekhtman N., Dowlati A., Massion P.P.,
RA   Rudin C.M., Poirier J.T.;
RT   "Chemosensitive relapse in small cell lung cancer proceeds through an EZH2-
RT   SLFN11 axis.";
RL   Cancer Cell 31:286-299(2017).
RN   [13]
RP   INDUCTION.
RX   PubMed=27440269; DOI=10.1158/1078-0432.ccr-16-1040;
RA   Lok B.H., Gardner E.E., Schneeberger V.E., Ni A., Desmeules P.,
RA   Rekhtman N., de Stanchina E., Teicher B.A., Riaz N., Powell S.N.,
RA   Poirier J.T., Rudin C.M.;
RT   "PARP inhibitor activity correlates with SLFN11 expression and demonstrates
RT   synergy with temozolomide in small cell lung cancer.";
RL   Clin. Cancer Res. 23:523-535(2017).
RN   [14]
RP   INDUCTION.
RX   PubMed=28212573; DOI=10.18632/oncotarget.15338;
RA   Allison Stewart C., Tong P., Cardnell R.J., Sen T., Li L., Gay C.M.,
RA   Masrorpour F., Fan Y., Bara R.O., Feng Y., Ru Y., Fujimoto J., Kundu S.T.,
RA   Post L.E., Yu K., Shen Y., Glisson B.S., Wistuba I., Heymach J.V.,
RA   Gibbons D.L., Wang J., Byers L.A.;
RT   "Dynamic variations in epithelial-to-mesenchymal transition (EMT), ATM, and
RT   SLFN11 govern response to PARP inhibitors and cisplatin in small cell lung
RT   cancer.";
RL   Oncotarget 8:28575-28587(2017).
RN   [15]
RP   FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH RPA1; MCM3 AND DHX9, AND
RP   MUTAGENESIS OF GLU-669.
RX   PubMed=29395061; DOI=10.1016/j.molcel.2018.01.012;
RA   Murai J., Tang S.W., Leo E., Baechler S.A., Redon C.E., Zhang H.,
RA   Al Abo M., Rajapakse V.N., Nakamura E., Jenkins L.M.M., Aladjem M.I.,
RA   Pommier Y.;
RT   "SLFN11 blocks stressed replication forks independently of ATR.";
RL   Mol. Cell 69:371-384(2018).
CC   -!- FUNCTION: Inhibitor of DNA replication that promotes cell death in
CC       response to DNA damage (PubMed:22927417, PubMed:26658330,
CC       PubMed:29395061). Acts as a guardian of the genome by killing cells
CC       with defective replication (PubMed:29395061). Persistently blocks
CC       stressed replication forks by opening chromatin across replication
CC       initiation sites at stressed replication forks, possibly leading to
CC       unwind DNA ahead of the MCM helicase and block fork progression,
CC       ultimately leading to cell death (PubMed:29395061). Acts independently
CC       of ATR (PubMed:29395061). Also acts as an interferon (IFN)-induced
CC       antiviral protein which acts as an inhibitor of retrovirus protein
CC       synthesis (PubMed:23000900). Specifically abrogates the production of
CC       retroviruses such as human immunodeficiency virus 1 (HIV-1) by acting
CC       as a specific inhibitor of the synthesis of retroviruses encoded
CC       proteins in a codon-usage-dependent manner (PubMed:23000900). Binds to
CC       tRNAs and exploits the unique viral codon bias towards A/T nucleotides
CC       (PubMed:23000900). The exact inhibition mechanism is unclear: may
CC       either sequester tRNAs, prevent their maturation via post-
CC       transcriptional processing or may accelerate their deacylation
CC       (PubMed:23000900). Does not inhibit reverse transcription, integration
CC       or production and nuclear export of viral RNA (PubMed:23000900).
CC       {ECO:0000269|PubMed:22927417, ECO:0000269|PubMed:23000900,
CC       ECO:0000269|PubMed:26658330, ECO:0000269|PubMed:29395061}.
CC   -!- SUBUNIT: Interacts with MCM3 (PubMed:29395061). Interacts with DHX9
CC       (PubMed:26625211, PubMed:29395061). Interacts with RPA1
CC       (PubMed:26658330, PubMed:29395061). {ECO:0000269|PubMed:26625211,
CC       ECO:0000269|PubMed:26658330, ECO:0000269|PubMed:29395061}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:22927417,
CC       ECO:0000269|PubMed:26658330, ECO:0000269|PubMed:29395061}. Chromosome
CC       {ECO:0000269|PubMed:26658330, ECO:0000269|PubMed:29395061}.
CC       Note=Recruited to stressed replication forks carrying extended RPA
CC       filaments (PubMed:29395061). Recruited to DNA damage sites via
CC       interaction with RPA1 (PubMed:26658330, PubMed:29395061).
CC       {ECO:0000269|PubMed:26658330, ECO:0000269|PubMed:29395061}.
CC   -!- TISSUE SPECIFICITY: Exhibits a wider expression range in ovarian and
CC       colon adenocarcinoma than in their corresponding healthy tissues.
CC       {ECO:0000269|PubMed:22927417}.
CC   -!- INDUCTION: Down-regulated in small cell lung cancer (SCLC) cells
CC       resistant to PARP inhibitor drugs (PubMed:26625211, PubMed:28196596,
CC       PubMed:27440269, PubMed:28212573). Up-regulated by type I interferons,
CC       poly-IC and poly-dAdT (PubMed:20956525, PubMed:23000900).
CC       {ECO:0000269|PubMed:20956525, ECO:0000269|PubMed:23000900,
CC       ECO:0000269|PubMed:26625211, ECO:0000269|PubMed:27440269,
CC       ECO:0000269|PubMed:28196596, ECO:0000269|PubMed:28212573}.
CC   -!- MISCELLANEOUS: Dominant determinant of sensitivity to DNA-damaging
CC       anticancer drugs: acts by mediating cell death in response to DNA
CC       damage induced by anticancer drugs (PubMed:29395061). Down-regulated in
CC       a number of chemoresistant tumors (PubMed:26625211, PubMed:28196596,
CC       PubMed:27440269, PubMed:28212573). {ECO:0000269|PubMed:26625211,
CC       ECO:0000269|PubMed:27440269, ECO:0000269|PubMed:28196596,
CC       ECO:0000269|PubMed:28212573, ECO:0000269|PubMed:29395061}.
CC   -!- SIMILARITY: Belongs to the Schlafen family. Subgroup III subfamily.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAB85010.1; Type=Frameshift; Evidence={ECO:0000305};
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DR   EMBL; AK074184; BAB85010.1; ALT_FRAME; mRNA.
DR   EMBL; AK092241; BAC03835.1; -; mRNA.
DR   EMBL; AL831964; CAD38606.2; -; mRNA.
DR   EMBL; AC060766; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CH471147; EAW80156.1; -; Genomic_DNA.
DR   EMBL; CH471147; EAW80157.1; -; Genomic_DNA.
DR   EMBL; CH471147; EAW80158.1; -; Genomic_DNA.
DR   EMBL; BC052586; AAH52586.1; -; mRNA.
DR   CCDS; CCDS11294.1; -.
DR   RefSeq; NP_001098057.1; NM_001104587.1.
DR   RefSeq; NP_001098058.1; NM_001104588.1.
DR   RefSeq; NP_001098059.1; NM_001104589.1.
DR   RefSeq; NP_001098060.1; NM_001104590.1.
DR   RefSeq; NP_689483.3; NM_152270.3.
DR   RefSeq; XP_005258125.1; XM_005258068.3.
DR   RefSeq; XP_006722234.1; XM_006722171.3.
DR   RefSeq; XP_011523767.1; XM_011525465.2.
DR   RefSeq; XP_016880788.1; XM_017025299.1.
DR   AlphaFoldDB; Q7Z7L1; -.
DR   SMR; Q7Z7L1; -.
DR   BioGRID; 124851; 363.
DR   IntAct; Q7Z7L1; 10.
DR   MINT; Q7Z7L1; -.
DR   STRING; 9606.ENSP00000378067; -.
DR   iPTMnet; Q7Z7L1; -.
DR   PhosphoSitePlus; Q7Z7L1; -.
DR   SwissPalm; Q7Z7L1; -.
DR   BioMuta; SLFN11; -.
DR   DMDM; 313104011; -.
DR   EPD; Q7Z7L1; -.
DR   jPOST; Q7Z7L1; -.
DR   MassIVE; Q7Z7L1; -.
DR   MaxQB; Q7Z7L1; -.
DR   PaxDb; Q7Z7L1; -.
DR   PeptideAtlas; Q7Z7L1; -.
DR   PRIDE; Q7Z7L1; -.
DR   ProteomicsDB; 69561; -.
DR   Antibodypedia; 15596; 53 antibodies from 15 providers.
DR   DNASU; 91607; -.
DR   Ensembl; ENST00000308377.8; ENSP00000312402.4; ENSG00000172716.17.
DR   Ensembl; ENST00000394566.5; ENSP00000378067.1; ENSG00000172716.17.
DR   Ensembl; ENST00000685675.1; ENSP00000510787.1; ENSG00000172716.17.
DR   GeneID; 91607; -.
DR   KEGG; hsa:91607; -.
DR   MANE-Select; ENST00000685675.1; ENSP00000510787.1; NM_001376007.1; NP_001362936.1.
DR   UCSC; uc002hjg.5; human.
DR   CTD; 91607; -.
DR   DisGeNET; 91607; -.
DR   GeneCards; SLFN11; -.
DR   HGNC; HGNC:26633; SLFN11.
DR   HPA; ENSG00000172716; Low tissue specificity.
DR   MIM; 614953; gene.
DR   neXtProt; NX_Q7Z7L1; -.
DR   OpenTargets; ENSG00000172716; -.
DR   PharmGKB; PA144596358; -.
DR   VEuPathDB; HostDB:ENSG00000172716; -.
DR   eggNOG; ENOG502QWKG; Eukaryota.
DR   GeneTree; ENSGT00410000025651; -.
DR   HOGENOM; CLU_007071_0_0_1; -.
DR   InParanoid; Q7Z7L1; -.
DR   OMA; ACMIRVK; -.
DR   OrthoDB; 211385at2759; -.
DR   PhylomeDB; Q7Z7L1; -.
DR   TreeFam; TF337168; -.
DR   PathwayCommons; Q7Z7L1; -.
DR   SignaLink; Q7Z7L1; -.
DR   BioGRID-ORCS; 91607; 17 hits in 1076 CRISPR screens.
DR   ChiTaRS; SLFN11; human.
DR   GeneWiki; SLFN11; -.
DR   GenomeRNAi; 91607; -.
DR   Pharos; Q7Z7L1; Tbio.
DR   PRO; PR:Q7Z7L1; -.
DR   Proteomes; UP000005640; Chromosome 17.
DR   RNAct; Q7Z7L1; protein.
DR   Bgee; ENSG00000172716; Expressed in monocyte and 139 other tissues.
DR   ExpressionAtlas; Q7Z7L1; baseline and differential.
DR   Genevisible; Q7Z7L1; HS.
DR   GO; GO:0005829; C:cytosol; IDA:HPA.
DR   GO; GO:0005654; C:nucleoplasm; IDA:HPA.
DR   GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR   GO; GO:0090734; C:site of DNA damage; IDA:UniProtKB.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IDA:UniProtKB.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0000049; F:tRNA binding; IDA:UniProtKB.
DR   GO; GO:0006974; P:cellular response to DNA damage stimulus; IDA:UniProtKB.
DR   GO; GO:0051607; P:defense response to virus; IMP:UniProtKB.
DR   GO; GO:0002376; P:immune system process; IEA:UniProtKB-KW.
DR   GO; GO:0008156; P:negative regulation of DNA replication; IDA:UniProtKB.
DR   GO; GO:2000134; P:negative regulation of G1/S transition of mitotic cell cycle; IMP:UniProtKB.
DR   GO; GO:0010942; P:positive regulation of cell death; IDA:UniProtKB.
DR   GO; GO:0043111; P:replication fork arrest; IDA:UniProtKB.
DR   Gene3D; 3.30.950.30; -; 1.
DR   Gene3D; 3.40.50.300; -; 2.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR029684; Schlafen.
DR   InterPro; IPR007421; Schlafen_AlbA_2_dom.
DR   InterPro; IPR038461; Schlafen_AlbA_2_dom_sf.
DR   InterPro; IPR018647; SLFN_3-like_DNA/RNA_helicase.
DR   PANTHER; PTHR12155; PTHR12155; 1.
DR   Pfam; PF04326; AlbA_2; 1.
DR   Pfam; PF09848; DUF2075; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
PE   1: Evidence at protein level;
KW   Antiviral defense; ATP-binding; Chromosome; DNA damage; Helicase;
KW   Hydrolase; Immunity; Nucleotide-binding; Nucleus; Reference proteome;
KW   RNA-binding; tRNA-binding.
FT   CHAIN           1..901
FT                   /note="Schlafen family member 11"
FT                   /id="PRO_0000283091"
FT   BINDING         599..606
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255"
FT   VARIANT         121
FT                   /note="V -> F (in dbSNP:rs12453150)"
FT                   /evidence="ECO:0000269|PubMed:14702039"
FT                   /id="VAR_031492"
FT   VARIANT         301
FT                   /note="N -> D (in dbSNP:rs4796077)"
FT                   /evidence="ECO:0000269|PubMed:14702039,
FT                   ECO:0000269|PubMed:15489334, ECO:0000269|PubMed:17974005,
FT                   ECO:0000269|Ref.4"
FT                   /id="VAR_031493"
FT   VARIANT         489
FT                   /note="R -> L (in dbSNP:rs9898983)"
FT                   /id="VAR_062186"
FT   VARIANT         822
FT                   /note="Y -> C (in dbSNP:rs3803860)"
FT                   /id="VAR_031494"
FT   MUTAGEN         605
FT                   /note="K->M: Abolishes ATPase activity without affecting
FT                   its role in DNA damage response; when associated with A-
FT                   668."
FT                   /evidence="ECO:0000269|PubMed:26658330"
FT   MUTAGEN         668
FT                   /note="D->A: Abolishes ATPase activity without affecting
FT                   its role in DNA damage response; when associated with M-
FT                   605."
FT                   /evidence="ECO:0000269|PubMed:26658330"
FT   MUTAGEN         669
FT                   /note="E->Q: Abolishes ATPase activity, leading to abolish
FT                   ability to inhibit DNA replication without affecting
FT                   subcellular location."
FT                   /evidence="ECO:0000269|PubMed:29395061"
FT   CONFLICT        20
FT                   /note="N -> S (in Ref. 1; BAC03835)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        143
FT                   /note="M -> T (in Ref. 1; BAC03835)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        324
FT                   /note="V -> M (in Ref. 2; CAD38606)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        665
FT                   /note="I -> V (in Ref. 1; BAC03835 and 2; CAD38606)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   901 AA;  102836 MW;  514FD89CB7C12E8D CRC64;
     MEANQCPLVV EPSYPDLVIN VGEVTLGEEN RKKLQKIQRD QEKERVMRAA CALLNSGGGV
     IRMAKKVEHP VEMGLDLEQS LRELIQSSDL QAFFETKQQG RCFYIFVKSW SSGPFPEDRS
     VKPRLCSLSS SLYRRSETSV RSMDSREAFC FLKTKRKPKI LEEGPFHKIH KGVYQELPNS
     DPADPNSDPA DLIFQKDYLE YGEILPFPES QLVEFKQFST KHFQEYVKRT IPEYVPAFAN
     TGGGYLFIGV DDKSREVLGC AKENVDPDSL RRKIEQAIYK LPCVHFCQPQ RPITFTLKIV
     NVLKRGELYG YACMIRVNPF CCAVFSEAPN SWIVEDKYVC SLTTEKWVGM MTDTDPDLLQ
     LSEDFECQLS LSSGPPLSRP VYSKKGLEHK KELQQLLFSV PPGYLRYTPE SLWRDLISEH
     RGLEELINKQ MQPFFRGILI FSRSWAVDLN LQEKPGVICD ALLIAQNSTP ILYTILREQD
     AEGQDYCTRT AFTLKQKLVN MGGYTGKVCV RAKVLCLSPE SSAEALEAAV SPMDYPASYS
     LAGTQHMEAL LQSLVIVLLG FRSLLSDQLG CEVLNLLTAQ QYEIFSRSLR KNRELFVHGL
     PGSGKTIMAM KIMEKIRNVF HCEAHRILYV CENQPLRNFI SDRNICRAET RKTFLRENFE
     HIQHIVIDEA QNFRTEDGDW YGKAKSITRR AKGGPGILWI FLDYFQTSHL DCSGLPPLSD
     QYPREELTRI VRNADPIAKY LQKEMQVIRS NPSFNIPTGC LEVFPEAEWS QGVQGTLRIK
     KYLTVEQIMT CVADTCRRFF DRGYSPKDVA VLVSTAKEVE HYKYELLKAM RKKRVVQLSD
     ACDMLGDHIV LDSVRRFSGL ERSIVFGIHP RTADPAILPN VLICLASRAK QHLYIFPWGG
     H
 
 
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