SLN1_HORVU
ID SLN1_HORVU Reviewed; 618 AA.
AC Q8W127;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=DELLA protein SLN1;
DE AltName: Full=Slender protein 1;
GN Name=SLN1;
OS Hordeum vulgare (Barley).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
OX NCBI_TaxID=4513;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, TISSUE SPECIFICITY, AND
RP MUTAGENESIS OF GLY-46.
RX PubMed=12011349; DOI=10.1104/pp.010917;
RA Chandler P.M., Marion-Poll A., Ellis M., Gubler F.;
RT "Mutants at the Slender1 locus of barley cv Himalaya. Molecular and
RT physiological characterization.";
RL Plant Physiol. 129:181-190(2002).
RN [2]
RP FUNCTION, SUBCELLULAR LOCATION, AND DEGRADATION.
RX PubMed=12011350; DOI=10.1104/pp.010918;
RA Gubler F., Chandler P.M., White R.G., Llewellyn D.J., Jacobsen J.V.;
RT "Gibberellin signaling in barley aleurone cells. Control of SLN1 and GAMYB
RT expression.";
RL Plant Physiol. 129:191-200(2002).
RN [3]
RP FUNCTION, PHOSPHORYLATION, AND PROBABLE UBIQUITINATION.
RX PubMed=12468736; DOI=10.1105/tpc.006197;
RA Fu X., Richards D.E., Ait-Ali T., Hynes L.W., Ougham H., Peng J.,
RA Harberd N.P.;
RT "Gibberellin-mediated proteasome-dependent degradation of the barley DELLA
RT protein SLN1 repressor.";
RL Plant Cell 14:3191-3200(2002).
CC -!- FUNCTION: Probable transcriptional regulator that acts as a repressor
CC of the gibberellin (GA) signaling pathway. Probably acts by
CC participating in large multiprotein complexes that repress
CC transcription of GA-inducible genes. Upon GA application, it is
CC degraded by the proteasome, allowing the GA signaling pathway. Acts as
CC a negative regulator of GAMYB gene expression.
CC {ECO:0000269|PubMed:12011349, ECO:0000269|PubMed:12011350,
CC ECO:0000269|PubMed:12468736}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:12011350}.
CC -!- TISSUE SPECIFICITY: Apparently restricted to regions where growth is
CC occurring in the leaf blade. Localizes almost exclusively to the basal
CC elongation zone (EZ) for the elongating blades of L1, L2 and L3. More
CC detailed fractionation of the L3 blade shows that in cv. Himalaya, it
CC is preferentially localized to the basal third of the EZ, but its
CC presence can still be detected toward the end of the EZ (at protein
CC level). {ECO:0000269|PubMed:12011349}.
CC -!- DOMAIN: The DELLA motif is required for its GA-induced degradation.
CC {ECO:0000305}.
CC -!- PTM: Phosphorylated. {ECO:0000269|PubMed:12468736}.
CC -!- PTM: Ubiquitinated (Probable). Upon GA application it is ubiquitinated,
CC leading to its subsequent degradation. {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the GRAS family. DELLA subfamily. {ECO:0000305}.
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DR EMBL; AF460219; AAL66734.1; -; Genomic_DNA.
DR AlphaFoldDB; Q8W127; -.
DR SMR; Q8W127; -.
DR PRIDE; Q8W127; -.
DR EnsemblPlants; HORVU.MOREX.r2.4HG0280720.1; HORVU.MOREX.r2.4HG0280720.1.CDS.1; HORVU.MOREX.r2.4HG0280720.
DR EnsemblPlants; HORVU.MOREX.r2.4HG0280720.1.mrna1; HORVU.MOREX.r2.4HG0280720.1.mrna1.cds1; HORVU.MOREX.r2.4HG0280720.1.
DR Gramene; HORVU.MOREX.r2.4HG0280720.1; HORVU.MOREX.r2.4HG0280720.1.CDS.1; HORVU.MOREX.r2.4HG0280720.
DR Gramene; HORVU.MOREX.r2.4HG0280720.1.mrna1; HORVU.MOREX.r2.4HG0280720.1.mrna1.cds1; HORVU.MOREX.r2.4HG0280720.1.
DR ExpressionAtlas; Q8W127; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR GO; GO:0009740; P:gibberellic acid mediated signaling pathway; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.1290; -; 1.
DR InterPro; IPR038088; DELLA_N_sf.
DR InterPro; IPR030006; TF_DELLA.
DR InterPro; IPR021914; TF_DELLA_N.
DR InterPro; IPR005202; TF_GRAS.
DR PANTHER; PTHR31636; PTHR31636; 1.
DR PANTHER; PTHR31636:SF47; PTHR31636:SF47; 1.
DR Pfam; PF12041; DELLA; 1.
DR Pfam; PF03514; GRAS; 1.
DR PROSITE; PS50985; GRAS; 1.
PE 1: Evidence at protein level;
KW Gibberellin signaling pathway; Nucleus; Phosphoprotein; Repressor;
KW Transcription; Transcription regulation; Ubl conjugation.
FT CHAIN 1..618
FT /note="DELLA protein SLN1"
FT /id="PRO_0000132244"
FT DOMAIN 221..614
FT /note="GRAS"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 106..137
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 159..197
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 228..284
FT /note="Leucine repeat I (LRI)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 303..368
FT /note="VHIID"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 382..421
FT /note="Leucine repeat II (LRII)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 431..535
FT /note="PFYRE"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT REGION 538..614
FT /note="SAW"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT MOTIF 39..43
FT /note="DELLA motif"
FT MOTIF 235..239
FT /note="LxCxE motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT MOTIF 334..338
FT /note="VHIID"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01191"
FT COMPBIAS 174..195
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MUTAGEN 46
FT /note="G->E: In sln1-d; dominant mutation that causes a
FT dwarf phenotype probably due to its inability to be
FT degraded."
FT /evidence="ECO:0000269|PubMed:12011349"
SQ SEQUENCE 618 AA; 65206 MW; 5E862C8E8207E045 CRC64;
MKREYQDGGG SGGGGDEMGS SRDKMMVSSS EAGEGEEVDE LLAALGYKVR ASDMADVAQK
LEQLEMAMGM GGPAPDDGFA THLATDTVHY NPTDLSSWVE SMLSELNAPP PPLPPAPPQL
NASTSSTVTG GGGYFDLPPS VDSSSSTYAL RPIISPPVAP ADLSADSVRD PKRMRTGGSS
TSSSSSSSSS LGGGAARSSV VEAAPPVAAA AAAPALPVVV VDTQEAGIRL VHALLACAEA
VQQENLSAAE ALVKQIPLLA ASQGGAMRKV AAYFGEALAR RVFRFRPQPD SSLLDAAFAD
LLHAHFYESC PYLKFAHFTA NQAILEAFAG CRRVHVVDFG IKQGMQWPAL LQALALRPGG
PPSFRLTGVG PPQPDETDAL QQVGWKLAQF AHTIRVDFQY RGLVAATLAD LEPFMLQPEG
EEDPNEEPEV IAVNSVFEMH RLLAQPGALE KVLGTVRAVR PRIVTVVEQE ANHNSGSFLD
RFTESLHYYS TMFDSLEGGS SGGPSEVSSG GAAPAAAAGT DQVMSEVYLG RQICNVVACE
GTERTERHET LGQWRNRLGN AGFETVHLGS NAYKQASTLL ALFAGGDGYK VEEKEGCLTL
GWHTRPLIAT SAWRLAAP