SLT11_NEUCR
ID SLT11_NEUCR Reviewed; 385 AA.
AC Q7RUX3; Q9P3R0;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 04-DEC-2007, sequence version 2.
DT 25-MAY-2022, entry version 101.
DE RecName: Full=Pre-mRNA-splicing factor slt-11;
GN Name=slt-11; ORFNames=B24P7.250, NCU03007;
OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 /
OS FGSC 987).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Sordariomycetidae; Sordariales; Sordariaceae; Neurospora.
OX NCBI_TaxID=367110;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987;
RX PubMed=12655011; DOI=10.1093/nar/gkg293;
RA Mannhaupt G., Montrone C., Haase D., Mewes H.-W., Aign V., Hoheisel J.D.,
RA Fartmann B., Nyakatura G., Kempken F., Maier J., Schulte U.;
RT "What's in the genome of a filamentous fungus? Analysis of the Neurospora
RT genome sequence.";
RL Nucleic Acids Res. 31:1944-1954(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987;
RX PubMed=12712197; DOI=10.1038/nature01554;
RA Galagan J.E., Calvo S.E., Borkovich K.A., Selker E.U., Read N.D.,
RA Jaffe D.B., FitzHugh W., Ma L.-J., Smirnov S., Purcell S., Rehman B.,
RA Elkins T., Engels R., Wang S., Nielsen C.B., Butler J., Endrizzi M.,
RA Qui D., Ianakiev P., Bell-Pedersen D., Nelson M.A., Werner-Washburne M.,
RA Selitrennikoff C.P., Kinsey J.A., Braun E.L., Zelter A., Schulte U.,
RA Kothe G.O., Jedd G., Mewes H.-W., Staben C., Marcotte E., Greenberg D.,
RA Roy A., Foley K., Naylor J., Stange-Thomann N., Barrett R., Gnerre S.,
RA Kamal M., Kamvysselis M., Mauceli E.W., Bielke C., Rudd S., Frishman D.,
RA Krystofova S., Rasmussen C., Metzenberg R.L., Perkins D.D., Kroken S.,
RA Cogoni C., Macino G., Catcheside D.E.A., Li W., Pratt R.J., Osmani S.A.,
RA DeSouza C.P.C., Glass N.L., Orbach M.J., Berglund J.A., Voelker R.,
RA Yarden O., Plamann M., Seiler S., Dunlap J.C., Radford A., Aramayo R.,
RA Natvig D.O., Alex L.A., Mannhaupt G., Ebbole D.J., Freitag M., Paulsen I.,
RA Sachs M.S., Lander E.S., Nusbaum C., Birren B.W.;
RT "The genome sequence of the filamentous fungus Neurospora crassa.";
RL Nature 422:859-868(2003).
CC -!- FUNCTION: Involved in pre-mRNA splicing. Facilitates the cooperative
CC formation of U2/U6 helix II in association with stem II in the
CC spliceosome. Binds to RNA (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Associated with the spliceosome. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SLT11 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB97290.2; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AL389890; CAB97290.2; ALT_INIT; Genomic_DNA.
DR EMBL; CM002236; EAA36157.2; -; Genomic_DNA.
DR RefSeq; XP_965393.2; XM_960300.3.
DR AlphaFoldDB; Q7RUX3; -.
DR SMR; Q7RUX3; -.
DR STRING; 5141.EFNCRP00000002305; -.
DR PRIDE; Q7RUX3; -.
DR EnsemblFungi; EAA36157; EAA36157; NCU03007.
DR GeneID; 3881543; -.
DR KEGG; ncr:NCU03007; -.
DR VEuPathDB; FungiDB:NCU03007; -.
DR HOGENOM; CLU_027112_1_0_1; -.
DR InParanoid; Q7RUX3; -.
DR OMA; PYFRKGR; -.
DR Proteomes; UP000001805; Chromosome 1, Linkage Group I.
DR GO; GO:0071014; C:post-mRNA release spliceosomal complex; IEA:EnsemblFungi.
DR GO; GO:0000974; C:Prp19 complex; IBA:GO_Central.
DR GO; GO:0071006; C:U2-type catalytic step 1 spliceosome; IBA:GO_Central.
DR GO; GO:0071007; C:U2-type catalytic step 2 spliceosome; IBA:GO_Central.
DR GO; GO:0036002; F:pre-mRNA binding; IBA:GO_Central.
DR GO; GO:0017070; F:U6 snRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12265; RRM_SLT11; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR039171; Cwc2/Slt11.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR034356; Slt11_RRM.
DR PANTHER; PTHR14089; PTHR14089; 2.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50102; RRM; 1.
PE 3: Inferred from homology;
KW mRNA processing; mRNA splicing; Nucleus; Reference proteome; RNA-binding;
KW Spliceosome.
FT CHAIN 1..385
FT /note="Pre-mRNA-splicing factor slt-11"
FT /id="PRO_0000212429"
FT DOMAIN 239..312
FT /note="RRM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 157..233
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 320..370
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 217..231
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 336..363
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 385 AA; 41285 MW; A31537C7DC0572E7 CRC64;
MPPQIKHDLN RSGWEATDFP SVCENCLPEN PYVKMLKEDY GAECKLCTRP FTVFSWAADR
AHARKKRTNI CLTCARLKNA CQCCILDLQF GLPIIIRDKA LELVAPGPQS EINREYFAQN
NERAIEEGRA GVEEYEKADE KARELLRRLA QSKPYFRKGR EVDEEGNPVN GSSSGAGRAT
GGNPAVGAGV GGVGPIRTRD SRAAAAAGAR PGGGRRPNAA PAPPPGPKDW LPPADKSIMS
LFVTGIEDDL PEFKIRDFFK AFGKIKSLVV SHMSHAAFVN YETREAAEKA SAECKGRAVI
AGCPLRVRWS VPKALGTMNK EQRSEMLRDG RSAFGSGQKT GGQKAIGGQN AQGGASGAQK
DDASNLTIAA PPGAADVQYA SLSGN