ID   SLU7_ORYSJ              Reviewed;         536 AA.
AC   Q6ZK48; A3BP97; B7E3M1;
DT   29-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 95.
DE   RecName: Full=Pre-mRNA-splicing factor SLU7;
GN   OrderedLocusNames=Os08g0127700, LOC_Os08g03390;
GN   ORFNames=OJ1163_G08.29, OsJ_024869,
GN   OsJ_25904 {ECO:0000312|EMBL:EEE67981.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Participates in the second catalytic step of pre-mRNA
CC       splicing, when the free hydroxyl group of exon I attacks the 3'-splice
CC       site to generate spliced mRNA and the excised lariat intron.
CC       {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the SLU7 family. {ECO:0000305}.
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DR   EMBL; AP003886; BAD08862.1; -; Genomic_DNA.
DR   EMBL; AP008214; BAF22819.1; -; Genomic_DNA.
DR   EMBL; AP014964; BAT03672.1; -; Genomic_DNA.
DR   EMBL; CM000145; EEE67981.1; -; Genomic_DNA.
DR   EMBL; AK059350; BAG86968.1; -; mRNA.
DR   EMBL; AK099242; BAG94015.1; -; mRNA.
DR   EMBL; AK121348; BAH00440.1; -; mRNA.
DR   RefSeq; XP_015650437.1; XM_015794951.1.
DR   AlphaFoldDB; Q6ZK48; -.
DR   SMR; Q6ZK48; -.
DR   STRING; 4530.OS08T0127700-01; -.
DR   PaxDb; Q6ZK48; -.
DR   PRIDE; Q6ZK48; -.
DR   EnsemblPlants; Os08t0127700-01; Os08t0127700-01; Os08g0127700.
DR   EnsemblPlants; Os08t0127700-02; Os08t0127700-02; Os08g0127700.
DR   GeneID; 4344572; -.
DR   Gramene; Os08t0127700-01; Os08t0127700-01; Os08g0127700.
DR   Gramene; Os08t0127700-02; Os08t0127700-02; Os08g0127700.
DR   KEGG; osa:4344572; -.
DR   eggNOG; KOG2560; Eukaryota.
DR   HOGENOM; CLU_019317_3_1_1; -.
DR   InParanoid; Q6ZK48; -.
DR   OMA; KKPFYVD; -.
DR   OrthoDB; 816947at2759; -.
DR   Proteomes; UP000000763; Chromosome 8.
DR   Proteomes; UP000007752; Chromosome 8.
DR   Proteomes; UP000059680; Chromosome 8.
DR   Genevisible; Q6ZK48; OS.
DR   GO; GO:0005681; C:spliceosomal complex; IBA:GO_Central.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0030628; F:pre-mRNA 3'-splice site binding; IEA:InterPro.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR   GO; GO:0008380; P:RNA splicing; IBA:GO_Central.
DR   InterPro; IPR021715; Slu7_dom.
DR   InterPro; IPR039974; Splicing_factor_SLU7.
DR   PANTHER; PTHR12942; PTHR12942; 1.
DR   Pfam; PF11708; Slu7; 1.
PE   2: Evidence at transcript level;
KW   Metal-binding; mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW   Spliceosome; Zinc; Zinc-finger.
FT   CHAIN           1..536
FT                   /note="Pre-mRNA-splicing factor SLU7"
FT                   /id="PRO_0000289206"
FT   ZN_FING         94..111
FT                   /note="CCHC-type"
FT   REGION          22..42
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          178..201
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        22..41
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        186..201
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   536 AA;  62076 MW;  36C9AC6A6D835742 CRC64;
     MATASVSFKS REDHRKQLEL EEARKAGLAP AEVDEDGKEI NPHIPQYMSS APWYLNADKP
     SLKHQRNWKS DPNYTKSWYD RGAKLFQANK YRKGACENCG AMTHDKKSCM ERPRSVGAKW
     TNINIAPDEK VESFELDYDG KRDRWNGYDP STYTRVIADY EAREEARKKY LKEQQLKKLE
     EKDGEEGDEN VASEEEDEED GLKIDEAKVD ESAQMDFAKV EKRVRTTGGG STGTVRNLRI
     REDTAKYLLN LDVNSAYYDP KTRSMREDPL PDADPNDKFY VGDNQNRLSG QALEFKQLNI
     HAWEAFDKGQ DIHMQAAPSQ AELLFKSFKI KKEKLKSENK DKIMEKYGNA ASEEPIPREL
     LLGQSEKEIE YDRTGRIIKG QDVALPKSKY EEDVFINNHT TVWGSWWKDH QWGYKCCKQT
     IRNSYCTGLA GIEAAEASAD LMKANMARKE AAEDEPVRHE EKRLATWGTD VPNDIVLDKK
     LLDEALKKEG ARRKEEMDER KRKYNVKWND EVTAEDMEAY RMKRIHHDDP MRDFLH