SLX9_DEBHA
ID SLX9_DEBHA Reviewed; 188 AA.
AC Q6BMZ5;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 25-MAY-2022, entry version 68.
DE RecName: Full=Ribosome biogenesis protein SLX9;
GN Name=SLX9; OrderedLocusNames=DEHA2F01430g;
OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990
OS / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Debaryomyces.
OX NCBI_TaxID=284592;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: Involved in ribosome biogenesis. Required for normal pre-rRNA
CC processing in internal transcribed spacer 1 (ITS1). May be involved in
CC the movements of the replication forks (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts with the 35S, 23S and 20S pre-rRNAs and with the U3
CC snoRNA. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SLX9 family. {ECO:0000305}.
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DR EMBL; CR382138; CAG88732.2; -; Genomic_DNA.
DR RefSeq; XP_460425.2; XM_460425.2.
DR AlphaFoldDB; Q6BMZ5; -.
DR SMR; Q6BMZ5; -.
DR STRING; 4959.XP_460425.2; -.
DR EnsemblFungi; CAG88732; CAG88732; DEHA2F01430g.
DR GeneID; 2903828; -.
DR KEGG; dha:DEHA2F01430g; -.
DR VEuPathDB; FungiDB:DEHA2F01430g; -.
DR eggNOG; ENOG502S2IS; Eukaryota.
DR HOGENOM; CLU_126135_0_0_1; -.
DR InParanoid; Q6BMZ5; -.
DR OMA; LKPKMQD; -.
DR OrthoDB; 1594718at2759; -.
DR Proteomes; UP000000599; Chromosome F.
DR GO; GO:0030686; C:90S preribosome; IEA:InterPro.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0030688; C:preribosome, small subunit precursor; IEA:InterPro.
DR GO; GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:InterPro.
DR InterPro; IPR028160; Slx9-like.
DR Pfam; PF15341; SLX9; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Ribosome biogenesis; rRNA processing.
FT CHAIN 1..188
FT /note="Ribosome biogenesis protein SLX9"
FT /id="PRO_0000333449"
FT REGION 1..89
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 30..57
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..81
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 188 AA; 21162 MW; 094C762075A56437 CRC64;
MAVKKRTTLR DKHAKSNTKS NLSGKIAELK EENNGQESDY HENPFLKLSK VTKKDKQLNK
SQNFSQKFDS STLNTSSNIS KSALRRRKRN ARNELKPKMD ELLQNLPETT NVIDPSAAAH
KPNDHKSTKF IKSTKASANL PNATKQTGHA KIMTQESKNF TNVLKNPQFR SSPFSALKDA
IAQNIQNQ