SLYA_YERPY
ID SLYA_YERPY Reviewed; 143 AA.
AC B1JJ73;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 1.
DT 25-MAY-2022, entry version 86.
DE RecName: Full=Transcriptional regulator SlyA {ECO:0000255|HAMAP-Rule:MF_01819};
GN Name=slyA {ECO:0000255|HAMAP-Rule:MF_01819}; OrderedLocusNames=YPK_1876;
OS Yersinia pseudotuberculosis serotype O:3 (strain YPIII).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=502800;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YPIII;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C.,
RA Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L.,
RA Challacombe J.F., Green L., Lindler L.E., Nikolich M.P., Richardson P.;
RT "Complete sequence of Yersinia pseudotuberculosis YPIII.";
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription regulator that can specifically activate or
CC repress expression of target genes. {ECO:0000255|HAMAP-Rule:MF_01819}.
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_01819}.
CC -!- SIMILARITY: Belongs to the SlyA family. {ECO:0000255|HAMAP-
CC Rule:MF_01819}.
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DR EMBL; CP000950; ACA68167.1; -; Genomic_DNA.
DR RefSeq; WP_002210955.1; NZ_CP009792.1.
DR PDB; 4AIH; X-ray; 2.40 A; A/B/C/D/E/F=1-143.
DR PDB; 4AIJ; X-ray; 2.05 A; A/B=1-143.
DR PDB; 4AIK; X-ray; 1.85 A; A/B=1-143.
DR PDBsum; 4AIH; -.
DR PDBsum; 4AIJ; -.
DR PDBsum; 4AIK; -.
DR AlphaFoldDB; B1JJ73; -.
DR SMR; B1JJ73; -.
DR EnsemblBacteria; ACA68167; ACA68167; YPK_1876.
DR GeneID; 66841281; -.
DR KEGG; ypy:YPK_1876; -.
DR PATRIC; fig|502800.11.peg.2546; -.
DR OMA; CSNDRRA; -.
DR GO; GO:0032993; C:protein-DNA complex; IPI:CollecTF.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IPI:CollecTF.
DR GO; GO:0001217; F:DNA-binding transcription repressor activity; IPI:CollecTF.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:CollecTF.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:CollecTF.
DR Gene3D; 1.10.10.10; -; 1.
DR HAMAP; MF_01819; HTH_type_SlyA; 1.
DR InterPro; IPR000835; HTH_MarR-typ.
DR InterPro; IPR023187; Tscrpt_reg_MarR-type_CS.
DR InterPro; IPR023071; Tscrpt_reg_SlyA.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF01047; MarR; 1.
DR PRINTS; PR00598; HTHMARR.
DR SMART; SM00347; HTH_MARR; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS01117; HTH_MARR_1; 1.
DR PROSITE; PS50995; HTH_MARR_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Activator; DNA-binding; Repressor; Transcription;
KW Transcription regulation.
FT CHAIN 1..143
FT /note="Transcriptional regulator SlyA"
FT /id="PRO_1000188020"
FT DOMAIN 2..135
FT /note="HTH marR-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01819"
FT DNA_BIND 49..72
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01819"
FT HELIX 5..23
FT /evidence="ECO:0007829|PDB:4AIK"
FT HELIX 25..27
FT /evidence="ECO:0007829|PDB:4AIK"
FT HELIX 31..42
FT /evidence="ECO:0007829|PDB:4AIK"
FT HELIX 49..56
FT /evidence="ECO:0007829|PDB:4AIK"
FT HELIX 60..72
FT /evidence="ECO:0007829|PDB:4AIK"
FT STRAND 75..80
FT /evidence="ECO:0007829|PDB:4AIK"
FT STRAND 88..92
FT /evidence="ECO:0007829|PDB:4AIK"
FT HELIX 94..96
FT /evidence="ECO:0007829|PDB:4AIK"
FT HELIX 97..114
FT /evidence="ECO:0007829|PDB:4AIK"
FT TURN 115..117
FT /evidence="ECO:0007829|PDB:4AIK"
FT HELIX 120..139
FT /evidence="ECO:0007829|PDB:4AIK"
SQ SEQUENCE 143 AA; 16170 MW; 62485065D1F5A451 CRC64;
MESTLGSDLA RLVRVWRALI DHRLKPLELT QTHWVTLYNI NRLPPEQSQI QLAKAIGIEQ
PSLVRTLDQL EEKGLITRHT CANDRRAKRI KLTEQSSPII EQVDGVICST RKEILGGISS
DEIAVLSGLI DKLEKNIIQL QTK