SM50_STRPU
ID SM50_STRPU Reviewed; 445 AA.
AC P11994;
DT 01-OCT-1989, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 2.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=50 kDa spicule matrix protein;
DE Flags: Precursor;
GN Name=SM50;
OS Strongylocentrotus purpuratus (Purple sea urchin).
OC Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea;
OC Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae;
OC Strongylocentrotus.
OX NCBI_TaxID=7668;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3030858; DOI=10.1016/0012-1606(87)90254-5;
RA Sucov H.M., Benson S.C., Robinson J.J., Britten R.J., Wilt F.H.,
RA Davidson E.H.;
RT "A lineage-specific gene encoding a major matrix protein of the sea urchin
RT embryo spicule. II. Structure of the gene and derived sequence of the
RT protein.";
RL Dev. Biol. 120:507-519(1987).
RN [2]
RP SEQUENCE REVISION.
RX PubMed=2019323; DOI=10.1016/0012-1606(91)90226-s;
RA Katoh-Fukui Y., Noce T., Ueda T., Fujiwara Y., Hashimoto N.,
RA Higashinakagawa T., Killian C.E., Livingston B.T., Wilt F.H., Benson S.C.,
RA Sucov H.M., Davidson E.H.;
RT "The corrected structure of the SM50 spicule matrix protein of
RT Strongylocentrotus purpuratus.";
RL Dev. Biol. 145:201-202(1991).
CC -!- FUNCTION: Major matrix protein of the sea urchin embryo spicule. The
CC function of the matrix proteins is to direct crystal growth in certain
CC orientations and inhibit growth in others.
CC -!- TISSUE SPECIFICITY: Expressed specifically in the micromere/primary
CC mesenchyme cells (PMC) lineage.
CC -!- DEVELOPMENTAL STAGE: Detected at hatching blastula, it remains at a
CC certain level from the mesenchyme blastula to the pluteus stages.
CC -!- DOMAIN: The repetitive domain may provide a calcite binding matrix.
CC -!- SIMILARITY: Belongs to the SM50 family. {ECO:0000305}.
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DR EMBL; M16231; AAA30071.1; -; Genomic_DNA.
DR EMBL; M16230; AAA30071.1; JOINED; Genomic_DNA.
DR PIR; A27263; A27263.
DR AlphaFoldDB; P11994; -.
DR STRING; 7668.SPU_018811-tr; -.
DR PRIDE; P11994; -.
DR eggNOG; KOG3544; Eukaryota.
DR HOGENOM; CLU_674973_0_0_1; -.
DR Proteomes; UP000007110; Unassembled WGS sequence.
DR Gene3D; 3.10.100.10; -; 1.
DR InterPro; IPR001304; C-type_lectin-like.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR016187; CTDL_fold.
DR InterPro; IPR009765; Pericardin-like_rpt.
DR Pfam; PF07054; Pericardin_rpt; 6.
DR SMART; SM00034; CLECT; 1.
DR SUPFAM; SSF56436; SSF56436; 1.
DR PROSITE; PS50041; C_TYPE_LECTIN_2; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat; Signal.
FT SIGNAL 1..15
FT CHAIN 16..445
FT /note="50 kDa spicule matrix protein"
FT /id="PRO_0000017561"
FT DOMAIN 29..159
FT /note="C-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
FT REGION 118..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 210..445
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..150
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 304..324
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 415..429
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 445 AA; 46262 MW; 10D08FDE088E639A CRC64;
MKGVLFIVAS LIAFATGQDC PAYYVRSQSG QSCYRYFNMR VPYRMASEFC EMVTPCGNGP
AKMGALASVS SPQENMEIYQ LVAGFSQDNQ MENEVWLGWN SQSPFFWEDG TPAYPNGFAA
FSSSPASPPR PGMPPTRSWP VNPQNPMSGP PGRAPVMKRQ NPPVRPGQGG RQIPQGVGPQ
WEAVEVTAMR AFVCEVPAGR NIPIGQQPGM GQGGFGNQQP GMGGRQPGFG NQPGMGGRQP
GFGNQPGMGG RQPGWGNQPG VGGRQPGMGG QQPGWGNQPG VGGRQPGMGG QPGVGGRQPG
FGNQPGMVDN NQAWWTTTRL GNQPGVGGRQ PGMGGQPGVG GRQPGVGGRQ PGFGNQPGVG
GRQPGMGGQQ PGMGGQPGVG GRQPGMGGRQ PGFGNQPGVG GRQPGMGGQQ PNNPNNPNPN
NPNNPNNPNP RFNRPRMLQE ADALA