SMAP1_ARATH
ID SMAP1_ARATH Reviewed; 62 AA.
AC Q9T0H2;
DT 09-JAN-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Small acidic protein 1;
GN Name=SMAP1; OrderedLocusNames=At4g13520; ORFNames=T6G15.70;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP IDENTIFICATION, FUNCTION, AND DISRUPTION PHENOTYPE.
RC STRAIN=cv. Columbia;
RX PubMed=16923017; DOI=10.1111/j.1365-313x.2006.02832.x;
RA Rahman A., Nakasone A., Chhun T., Ooura C., Biswas K.K., Uchimiya H.,
RA Tsurumi S., Baskin T.I., Tanaka A., Oono Y.;
RT "A small acidic protein 1 (SMAP1) mediates responses of the Arabidopsis
RT root to the synthetic auxin 2,4-dichlorophenoxyacetic acid.";
RL Plant J. 47:788-801(2006).
RN [6]
RP TISSUE SPECIFICITY.
RC STRAIN=cv. Columbia;
RX PubMed=19307045; DOI=10.1016/j.jplph.2009.02.005;
RA Nakasone A., Kawai-Yamada M., Kiyosue T., Narumi I., Uchimiya H., Oono Y.;
RT "A gene encoding SMALL ACIDIC PROTEIN 2 potentially mediates the response
RT to synthetic auxin, 2,4-dichlorophenoxyacetic acid, in Arabidopsis
RT thaliana.";
RL J. Plant Physiol. 166:1307-1313(2009).
RN [7]
RP FUNCTION, DOMAIN, AND INTERACTION WITH COP9 SIGNALOSOME.
RC STRAIN=cv. Columbia;
RX PubMed=22576848; DOI=10.1104/pp.111.188409;
RA Nakasone A., Fujiwara M., Fukao Y., Biswas K.K., Rahman A.,
RA Kawai-Yamada M., Narumi I., Uchimiya H., Oono Y.;
RT "SMALL ACIDIC PROTEIN1 acts with RUB modification components, the COP9
RT signalosome, and AXR1 to regulate growth and development of Arabidopsis.";
RL Plant Physiol. 160:93-105(2012).
CC -!- FUNCTION: Mediates responses to the synthetic auxin 2,4-
CC dichlorophenoxyacetic acid (2,4-D). Not involved in the response to
CC indole-3-acetic acid (IAA). Interacts with RUB modification-related
CC components and may regulate the cullin-ring ubiquitin E3 ligase complex
CC (CRL) activity. {ECO:0000269|PubMed:16923017,
CC ECO:0000269|PubMed:22576848}.
CC -!- SUBUNIT: Interacts with the COP9 signalosome.
CC {ECO:0000269|PubMed:22576848}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, flowers, siliques, stems,
CC leaves and seeds. In flowers, detected in petals, anthers and pistils.
CC {ECO:0000269|PubMed:19307045}.
CC -!- DOMAIN: The F/D-rich region (45-62) is necessary but not sufficient for
CC SMAP1 function. {ECO:0000269|PubMed:22576848}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype, except a longer hypocotyl
CC in light-grown seedlings. {ECO:0000269|PubMed:16923017}.
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DR EMBL; AL049656; CAB41110.1; -; Genomic_DNA.
DR EMBL; AL161536; CAB78394.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE83288.1; -; Genomic_DNA.
DR EMBL; CP002687; ANM67179.1; -; Genomic_DNA.
DR EMBL; AF361862; AAK32874.1; -; mRNA.
DR EMBL; AY088143; AAM65688.1; -; mRNA.
DR EMBL; AY129486; AAM91072.1; -; mRNA.
DR PIR; T06654; T06654.
DR RefSeq; NP_001329023.1; NM_001340863.1.
DR RefSeq; NP_567406.1; NM_117426.4.
DR AlphaFoldDB; Q9T0H2; -.
DR BioGRID; 12281; 7.
DR STRING; 3702.AT4G13520.1; -.
DR PaxDb; Q9T0H2; -.
DR PRIDE; Q9T0H2; -.
DR ProteomicsDB; 234588; -.
DR EnsemblPlants; AT4G13520.1; AT4G13520.1; AT4G13520.
DR EnsemblPlants; AT4G13520.2; AT4G13520.2; AT4G13520.
DR GeneID; 826984; -.
DR Gramene; AT4G13520.1; AT4G13520.1; AT4G13520.
DR Gramene; AT4G13520.2; AT4G13520.2; AT4G13520.
DR KEGG; ath:AT4G13520; -.
DR Araport; AT4G13520; -.
DR TAIR; locus:2140887; AT4G13520.
DR eggNOG; ENOG502R1QA; Eukaryota.
DR HOGENOM; CLU_197800_0_0_1; -.
DR InParanoid; Q9T0H2; -.
DR OMA; ENDADFY; -.
DR OrthoDB; 1630109at2759; -.
DR PhylomeDB; Q9T0H2; -.
DR PRO; PR:Q9T0H2; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9T0H2; baseline and differential.
DR Genevisible; Q9T0H2; AT.
DR GO; GO:0009734; P:auxin-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0040029; P:regulation of gene expression, epigenetic; IEP:TAIR.
DR GO; GO:0009733; P:response to auxin; IMP:TAIR.
PE 1: Evidence at protein level;
KW Auxin signaling pathway; Reference proteome.
FT CHAIN 1..62
FT /note="Small acidic protein 1"
FT /id="PRO_0000420767"
SQ SEQUENCE 62 AA; 6942 MW; 2A52436B313E955B CRC64;
MRPMQLDMLS EMDDAGSSMA MDVDDLEAME ILNEGGLVSD NKLADADFFN KFDDDFDDTD
IN
