SMAX1_ORYSJ
ID SMAX1_ORYSJ Reviewed; 1041 AA.
AC Q6Z517; A3BR72; Q0J6X5;
DT 16-MAR-2016, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 89.
DE RecName: Full=Protein SMAX1-like {ECO:0000305};
GN Name=SMAX1L {ECO:0000305};
GN OrderedLocusNames=Os08g0250900 {ECO:0000312|EMBL:BAF23290.1},
GN LOC_Os08g15230 {ECO:0000305};
GN ORFNames=OSJNBa0036E18.7 {ECO:0000312|EMBL:BAD05509.1},
GN OSNPB_080250900 {ECO:0000312|EMBL:BAT04561.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000312|Proteomes:UP000059680};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP REVIEW.
RX PubMed=25179782; DOI=10.1016/j.pbi.2014.08.001;
RA Bennett T., Leyser O.;
RT "Strigolactone signalling: standing on the shoulders of DWARFs.";
RL Curr. Opin. Plant Biol. 22:7-13(2014).
CC -!- FUNCTION: May act downstream of MAX2 to negatively regulate
CC karrikins/strigolactone responses. Acts probably specifically in the
CC karrikin pathway. May function in a transcriptional corepressor
CC complex. {ECO:0000250|UniProtKB:Q9FHH2}.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF23290.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=BAT04561.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=EAZ42061.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP005161; BAD05509.1; -; Genomic_DNA.
DR EMBL; AP008214; BAF23290.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP014964; BAT04561.1; ALT_INIT; Genomic_DNA.
DR EMBL; CM000145; EAZ42061.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; XP_015650285.1; XM_015794799.1.
DR AlphaFoldDB; Q6Z517; -.
DR STRING; 4530.OS08T0250900-01; -.
DR PaxDb; Q6Z517; -.
DR PRIDE; Q6Z517; -.
DR GeneID; 4345082; -.
DR KEGG; osa:4345082; -.
DR eggNOG; KOG1051; Eukaryota.
DR InParanoid; Q6Z517; -.
DR OrthoDB; 173851at2759; -.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000007752; Chromosome 8.
DR Proteomes; UP000059680; Chromosome 8.
DR Gene3D; 1.10.1780.10; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF02861; Clp_N; 2.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF81923; SSF81923; 1.
DR PROSITE; PS51903; CLP_R; 1.
PE 3: Inferred from homology;
KW Reference proteome; Repeat; Stress response; Transcription;
KW Transcription regulation.
FT CHAIN 1..1041
FT /note="Protein SMAX1-like"
FT /id="PRO_0000435825"
FT DOMAIN 8..188
FT /note="Clp R"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 12..98
FT /note="Repeat 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 117..188
FT /note="Repeat 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 189..214
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 482..513
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 889..913
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 189..205
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1041 AA; 109247 MW; D56214D91DB80504 CRC64;
MRADLSTIQQ TLTPEAAAAL ARAMDEAGRR RHGQTTPLHV AAALLAAPAG LLRQACARAA
SAAGVGGGGG AAAGAGAGAH PLHCRALELC FSVALDRLPA AAAAAAAAHG AGASPPVSNA
LVAALKRAQA QQRRGCPEAA QQPLLAVKVE LEQLVLSILD DPSVSRVMRE ASFSSAAVKS
IIEQSLSAPS PCPSAAASTT TAGPGPLSPS PSPLPRAGAA NAYLNPRLAA AAAVASGGGG
GGGDDARKVI DVMLKPTRRN PVLVGDAGPD AVLKEAIRRI PTAGFPALAG AKVLPLEAEL
AKLAGDKAAM AARIGDLGAV VERLLGEHGG VVLDLGDLKW LVDGPAAAAS EGGKAAVAEM
GRLLRRFGRA GVWAVCTAAC TTYLRCKVYH PGMEAEWDLH AVPIARGGAP IAAAAAGSAL
RPGGSGILNS SMGMLSPALR PMPVTPTALR WPPPGSDQSP AAKPAMCLLC KGSYERELAK
LEAEQTDKPA SRPEAAKPGL PHWLQLSNDQ NKAKEQELKL KRSKDELERK WRETCARIHS
ACPMAPALSV PLATFTPRPP VEPKLGVARG AAVPTLKMNP SWEKPSVAPT LELRKSPPAS
PVKTDLVLCR LDPGTNPAVE NEQKESCEGL TALQKAKIAG ISDIESFKRL LKGLTEKVSW
QSDAASAIAA VVIQCRSGSG KRRNVGTRGD MWLLFVGPDQ AGKRKMVNAL SELMANTRPV
VVNFGGDSRL GRVGNDGPNM GFWGKTALDR VTEAVRQNPF SVIVLEGIDQ VDVVVHGKIK
RAMETGRLPD SRGREVSLGN VIFVLTTNWV PEELKGSNVE TLLRGEERML ESTSSSWQLE
LSIGDKQVKH RADWLCDDVR PAKLAKELSS SHGLSLDLNL AVGALDDTEG SHNSSDVSVE
QEQEKGQLAV KRSTPAPGSD ILELVDDAIV FRPVDFTPFR KTVTDCISAK FESVMGSSSS
FRIDEDAVDW MVGSVWLTDE KIEDWAEKVL KPSIERLWHN VKHDSGRSII RLTAVAAKAL
PRWGGGREGL PVAVTIAIDG M