SMD_ASPFN
ID SMD_ASPFN Reviewed; 289 AA.
AC B8NQ51;
DT 04-MAR-2015, integrated into UniProtKB/Swiss-Prot.
DT 03-MAR-2009, sequence version 1.
DT 03-AUG-2022, entry version 55.
DE RecName: Full=Sphingomyelinase D {ECO:0000303|PubMed:24223912};
DE Short=SMase D {ECO:0000303|PubMed:24223912};
DE EC=3.1.4.41 {ECO:0000269|PubMed:24223912};
DE Flags: Precursor;
GN ORFNames=AFLA_004420 {ECO:0000312|EMBL:EED47801.1};
OS Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357
OS / JCM 12722 / SRRC 167).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Circumdati.
OX NCBI_TaxID=332952;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC
RC 167;
RX PubMed=25883274; DOI=10.1128/genomea.00168-15;
RA Nierman W.C., Yu J., Fedorova-Abrams N.D., Losada L., Cleveland T.E.,
RA Bhatnagar D., Bennett J.W., Dean R., Payne G.A.;
RT "Genome sequence of Aspergillus flavus NRRL 3357, a strain that causes
RT aflatoxin contamination of food and feed.";
RL Genome Announc. 3:E0016815-E0016815(2015).
RN [2]
RP IDENTIFICATION, CATALYTIC ACTIVITY, ACTIVITY REGULATION, DOMAIN, AND
RP FUNCTION.
RX PubMed=24223912; DOI=10.1371/journal.pone.0079240;
RA Dias-Lopes C., Neshich I.A., Neshich G., Ortega J.M., Granier C.,
RA Chavez-Olortegui C., Molina F., Felicori L.;
RT "Identification of new sphingomyelinases D in pathogenic fungi and other
RT pathogenic organisms.";
RL PLoS ONE 8:E79240-E79240(2013).
CC -!- FUNCTION: Catalyzes the hydrolysis of sphingomyelin. Sphingomyelinases
CC D are produced by some spider in their venoms, but also by arthropods
CC such as ticks, or pathogenic bacteria and fungi. They might play a role
CC in pathogenicity through different mechanisms, such as membrane
CC destabilization and host cell penetration, but also pulmonary
CC inflammation and cutaneous lesions. {ECO:0000269|PubMed:24223912}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sphingomyelin + H2O = an N-acylsphing-4-enine 1-phosphate +
CC choline + H(+); Xref=Rhea:RHEA:20984, ChEBI:CHEBI:15354,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:17636,
CC ChEBI:CHEBI:57674; EC=3.1.4.41;
CC Evidence={ECO:0000269|PubMed:24223912};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000250|UniProtKB:Q8I914};
CC Note=Binds 1 Mg(2+) ion per subunit. {ECO:0000250|UniProtKB:Q8I914};
CC -!- ACTIVITY REGULATION: Sphingomyelinase activity is reduced by 33 percent
CC following addition of EDTA. {ECO:0000269|PubMed:24223912}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- DOMAIN: The SMD-tail motif is highly conserved and may be responsible
CC for structural stabilization. {ECO:0000303|PubMed:24223912}.
CC -!- SIMILARITY: Belongs to the sphingomyelinase D/phospholipase D family.
CC {ECO:0000305}.
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DR EMBL; EQ963482; EED47801.1; -; Genomic_DNA.
DR RefSeq; XP_002382643.1; XM_002382602.1.
DR AlphaFoldDB; B8NQ51; -.
DR SMR; B8NQ51; -.
DR STRING; 5059.CADAFLAP00010508; -.
DR EnsemblFungi; EED47801; EED47801; AFLA_004420.
DR VEuPathDB; FungiDB:AFLA_004420; -.
DR eggNOG; ENOG502S5U7; Eukaryota.
DR HOGENOM; CLU_059400_0_0_1; -.
DR OMA; SWQCANA; -.
DR Proteomes; UP000001875; Unassembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0050290; F:sphingomyelin phosphodiesterase D activity; IEA:UniProtKB-EC.
DR GO; GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
DR Gene3D; 3.20.20.190; -; 1.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR InterPro; IPR016674; SMase_D/PLipase_D.
DR PIRSF; PIRSF016632; Phospholipase_actinobac/fun; 1.
DR SUPFAM; SSF51695; SSF51695; 1.
PE 1: Evidence at protein level;
KW Hydrolase; Lipid degradation; Lipid metabolism; Magnesium; Metal-binding;
KW Secreted; Signal; Virulence.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..289
FT /note="Sphingomyelinase D"
FT /evidence="ECO:0000255"
FT /id="PRO_0000431992"
FT MOTIF 282..289
FT /note="SMD-tail"
FT /evidence="ECO:0000255"
FT ACT_SITE 34
FT /evidence="ECO:0000250|UniProtKB:Q8I914"
FT BINDING 54
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:Q8I914"
FT BINDING 56
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:Q8I914"
FT BINDING 103
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:Q8I914"
SQ SEQUENCE 289 AA; 32525 MW; 3403518A6BCDB301 CRC64;
MQSISVLICV LLALSILNFT VASLTQRPIY AIAHRVLRNE AVTAALSHGA NALEVDLTAW
YFGWWADHDG KLFSAGSTAR DLFKFIAQKQ WTKDYNISFV WLDIKNPDFC RKGRPCSIEA
LRDLAREILE PAGIRVLYGF FETAESRGFK VIRDGLNSNE AVVLSGETST ILHLYNISGA
GIPVKQMVMD FGDSWLRKGV DIYPELRYGS WKRDHGKLGK VFSWTSAQGD TEMVRYLLRE
AGIDGLIYGY QTDEYNDKSG PKSALKDIVD FVEAHSDTHR MATEDDAPW