SMG8_AEDAE
ID SMG8_AEDAE Reviewed; 916 AA.
AC Q17G65;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-JUL-2006, sequence version 1.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=Nonsense-mediated mRNA decay factor SMG8 {ECO:0000250|UniProtKB:Q8ND04};
DE AltName: Full=Protein smg-8 homolog;
GN ORFNames=AAEL003157;
OS Aedes aegypti (Yellowfever mosquito) (Culex aegypti).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae;
OC Culicinae; Aedini; Aedes; Stegomyia.
OX NCBI_TaxID=7159;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LVPib12;
RX PubMed=17510324; DOI=10.1126/science.1138878;
RA Nene V., Wortman J.R., Lawson D., Haas B.J., Kodira C.D., Tu Z.J.,
RA Loftus B.J., Xi Z., Megy K., Grabherr M., Ren Q., Zdobnov E.M., Lobo N.F.,
RA Campbell K.S., Brown S.E., Bonaldo M.F., Zhu J., Sinkins S.P.,
RA Hogenkamp D.G., Amedeo P., Arensburger P., Atkinson P.W., Bidwell S.L.,
RA Biedler J., Birney E., Bruggner R.V., Costas J., Coy M.R., Crabtree J.,
RA Crawford M., DeBruyn B., DeCaprio D., Eiglmeier K., Eisenstadt E.,
RA El-Dorry H., Gelbart W.M., Gomes S.L., Hammond M., Hannick L.I.,
RA Hogan J.R., Holmes M.H., Jaffe D., Johnston S.J., Kennedy R.C., Koo H.,
RA Kravitz S., Kriventseva E.V., Kulp D., Labutti K., Lee E., Li S.,
RA Lovin D.D., Mao C., Mauceli E., Menck C.F., Miller J.R., Montgomery P.,
RA Mori A., Nascimento A.L., Naveira H.F., Nusbaum C., O'Leary S.B., Orvis J.,
RA Pertea M., Quesneville H., Reidenbach K.R., Rogers Y.-H.C., Roth C.W.,
RA Schneider J.R., Schatz M., Shumway M., Stanke M., Stinson E.O.,
RA Tubio J.M.C., Vanzee J.P., Verjovski-Almeida S., Werner D., White O.R.,
RA Wyder S., Zeng Q., Zhao Q., Zhao Y., Hill C.A., Raikhel A.S., Soares M.B.,
RA Knudson D.L., Lee N.H., Galagan J., Salzberg S.L., Paulsen I.T.,
RA Dimopoulos G., Collins F.H., Bruce B., Fraser-Liggett C.M., Severson D.W.;
RT "Genome sequence of Aedes aegypti, a major arbovirus vector.";
RL Science 316:1718-1723(2007).
CC -!- FUNCTION: Involved in nonsense-mediated decay (NMD) of mRNAs containing
CC premature stop codons. Probable component of kinase complex containing
CC SMG1 and recruited to stalled ribosomes (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SMG8 family. {ECO:0000305}.
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DR EMBL; CH477265; EAT45584.1; -; Genomic_DNA.
DR RefSeq; XP_001656499.1; XM_001656449.1.
DR AlphaFoldDB; Q17G65; -.
DR SMR; Q17G65; -.
DR STRING; 7159.AAEL003157-PA; -.
DR GeneID; 5577419; -.
DR KEGG; aag:5577419; -.
DR VEuPathDB; VectorBase:AAEL003157; -.
DR eggNOG; KOG3692; Eukaryota.
DR HOGENOM; CLU_008116_0_0_1; -.
DR InParanoid; Q17G65; -.
DR OMA; HCTVKDS; -.
DR OrthoDB; 645776at2759; -.
DR PhylomeDB; Q17G65; -.
DR Proteomes; UP000008820; Chromosome 2.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.
DR InterPro; IPR028802; SMG8.
DR InterPro; IPR019354; SMG8/SMG9.
DR PANTHER; PTHR13091; PTHR13091; 1.
DR Pfam; PF10220; Smg8_Smg9; 1.
PE 3: Inferred from homology;
KW Nonsense-mediated mRNA decay; Reference proteome.
FT CHAIN 1..916
FT /note="Nonsense-mediated mRNA decay factor SMG8"
FT /id="PRO_0000378170"
FT REGION 566..626
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 566..603
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 916 AA; 103707 MW; 436065CA0BB3E681 CRC64;
MNPVESFVFP DIPKTIRDVL FKPDKQMIIV GVIGKSSNPT CNKLIGFNLL TTHPALTDSK
CCEGRIKFYF ENDGNVLYLH FETTFDQQVM AEQLAKAIDT GVQDNFVNFN SYVRSRFARM
LLFAIQVCHM IVLVEPTSVF DTSYLSIFKS LKIIREKYVL KFLPKLLKAS NVGNYMGKEA
RLCSPRFIFL FEGTCDIKPE DVEKLEALEC AVEEDIYKML RTEFIITNNS AMSLFSIPRS
KKFVFFSSDS KAKSDPLLDS IDMLMEYLDK PAAGQQGDKD EEEFMNKLRP CAGYGMSAWS
VGAGAPKTER ERSVLTLIKK HVAEAFEHGF DDSVSKYRGR SHFAVPGFKS WFEGFKFLHK
IFIENPDNQN YEPVDVDYKA YLENFHKVID IDERFFADVC EHGMELAMVN YKEMLPHHYS
GTFHEKKYQQ ARELFLRYAR GPEVEKHELK LKDYCDSIWL NGKQQCEYPS LRGNPCALGK
HKANDPMDHS SGVVFVSACN CGRTQGHRED PYTIRQANYE FYQLIAKSCS NCTLLERIKF
PVFEPSSSDF RAAEFINKNL SNLMSLENSN RTPDTGTHPP MTNDHSPHLS GSQKSQDSAS
NLTFSIDDKE ENETHAKNYA SQGDADEALE QENLNEIVIK VGEHADQTDK EKAILRQPST
TEYLPGMLHA TSPIGLLPQF PSWSLVCLGP SSIYTHNSGL PEHIQSGFLS GSNFLLPWDV
SVRLEHAQSW AASYEKIRNR KKNVSQSKSS DSSNNFTLKI FIGIEYECLR GHRFIMSGPD
TVLRGGSGIV RDSGSKVVFN DMPIYFPCLC RNSNVAQLMR VHIVTPKAPV NVILEPKAKI
FQNNMQSNFT FTTGQPEPIK LTQSAYWILR LPFVYEGDEG PLMPPSEVNA SNAAMHGILL
AGMYGIKESE ISEELL