SMG8_DROGR
ID SMG8_DROGR Reviewed; 945 AA.
AC B4JE52;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 52.
DE RecName: Full=Nonsense-mediated mRNA decay factor SMG8 {ECO:0000250|UniProtKB:Q8ND04};
DE AltName: Full=Protein smg-8 homolog;
GN ORFNames=GH11308;
OS Drosophila grimshawi (Hawaiian fruit fly) (Idiomyia grimshawi).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC Drosophilidae; Drosophila; Hawaiian Drosophila.
OX NCBI_TaxID=7222;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tucson 15287-2541.00;
RX PubMed=17994087; DOI=10.1038/nature06341;
RG Drosophila 12 genomes consortium;
RT "Evolution of genes and genomes on the Drosophila phylogeny.";
RL Nature 450:203-218(2007).
CC -!- FUNCTION: Involved in nonsense-mediated decay (NMD) of mRNAs containing
CC premature stop codons. Probable component of kinase complex containing
CC nonC and recruited to stalled ribosomes (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SMG8 family. {ECO:0000305}.
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DR EMBL; CH916368; EDW03572.1; -; Genomic_DNA.
DR RefSeq; XP_001988705.1; XM_001988669.1.
DR AlphaFoldDB; B4JE52; -.
DR STRING; 7222.FBpp0145214; -.
DR eggNOG; KOG3692; Eukaryota.
DR HOGENOM; CLU_008116_0_0_1; -.
DR InParanoid; B4JE52; -.
DR OMA; HCTVKDS; -.
DR PhylomeDB; B4JE52; -.
DR Proteomes; UP000001070; Unassembled WGS sequence.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.
DR InterPro; IPR028802; SMG8.
DR InterPro; IPR019354; SMG8/SMG9.
DR PANTHER; PTHR13091; PTHR13091; 1.
DR Pfam; PF10220; Smg8_Smg9; 1.
PE 3: Inferred from homology;
KW Nonsense-mediated mRNA decay; Reference proteome.
FT CHAIN 1..945
FT /note="Nonsense-mediated mRNA decay factor SMG8"
FT /id="PRO_0000378174"
FT REGION 563..604
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 633..671
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 646..660
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 945 AA; 107543 MW; 6D82C0D07A83CB27 CRC64;
MSFRKYYSWK YPDVPEDVAP LLLELKNSLV VVGVVGRSKC SLANKMSVFG MQPEETHEPA
NGQIMCYYKP GTSTLLLHFE STHDEVVLGQ KLLEQTSIDF DHFYGNMRSQ FVRMMLLALH
TCHIVVYVET GQTFDPALVT ICQLLKYVRE QHLLEFLPQL LRETSAGNLL GDRARLCTPR
ILFIFENYPA DVEKTREFIS THEFQTEDKI YELFRQYNIV MQSASNSLLA LPNNKQFVFY
NANEILRPDR LLLAIDALNA TMYKQDVKEE EEDLEIIALA PFEGFVKPFG DAYTVRKSDE
QLYRESHTVW HFLQRHVQDA LEGCFDEGSF KQLSQSPPFQ LLNFKTWHMC MVSIHKLLVG
NVEDVNYVST NAHYQAYLRD FTESLNYEKR FWYHLSELGL KKGISAYKHS AAVTYGSAAH
KQMLANATLV FEEEGRGPYA ELALAKLNDV CLRYWHDGRQ QCEFPSLRGN PCILPRDVSH
DKHSSGVVHI SSCNCGRTLG RREDPYTLRQ ANYDYYEHMA VMCNLCVKVK RFQFPVFTPS
ISDYRAAAFE AAFPLLLQAH KNRAEPQVEE DSDQEANAAE EPYSQPATEA EPEPEKEPQA
SANEWSQPMS ATYGSDLNMS IAGFGVSLKE GGAEAEVEEA EVCDKGSQDN STSSDTSTES
EIELQPKERS AQKANQILIS TTEYLPGLVH MCSGLELLPL FPSWSLACVG PSSIYSHNTG
LQEHFQSGFL SGANYLLPWD VQVRLVQPHY KHQQQQLMGK KNQRYRKQGD RLALKIFIGF
EYECSRGHRF MMRSPERVLR GGADIERDTS TKVINNNMPL YFPCPCRAQN TFLAQLMRIH
VVTPKAPVNI ILDPKVLVGK YTFTLGCSIL PMLSQSAYWI LRLPYVYQGD NEIIAPPEKI
EPTNRLAGGC ILAGLFGIAE TESMELKEPR ITSMTFTRLQ SHAYK