SMG8_DROVI
ID SMG8_DROVI Reviewed; 962 AA.
AC B4LS82;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 53.
DE RecName: Full=Nonsense-mediated mRNA decay factor SMG8 {ECO:0000250|UniProtKB:Q8ND04};
DE AltName: Full=Protein smg-8 homolog;
GN ORFNames=GJ17645;
OS Drosophila virilis (Fruit fly).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC Drosophilidae; Drosophila.
OX NCBI_TaxID=7244;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tucson 15010-1051.87;
RX PubMed=17994087; DOI=10.1038/nature06341;
RG Drosophila 12 genomes consortium;
RT "Evolution of genes and genomes on the Drosophila phylogeny.";
RL Nature 450:203-218(2007).
CC -!- FUNCTION: Involved in nonsense-mediated decay (NMD) of mRNAs containing
CC premature stop codons. Probable component of kinase complex containing
CC nonC and recruited to stalled ribosomes (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SMG8 family. {ECO:0000305}.
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DR EMBL; CH940649; EDW64768.1; -; Genomic_DNA.
DR RefSeq; XP_002052613.1; XM_002052577.2.
DR AlphaFoldDB; B4LS82; -.
DR STRING; 7244.FBpp0232062; -.
DR PRIDE; B4LS82; -.
DR EnsemblMetazoa; FBtr0233570; FBpp0232062; FBgn0204814.
DR eggNOG; KOG3692; Eukaryota.
DR HOGENOM; CLU_008116_0_0_1; -.
DR InParanoid; B4LS82; -.
DR OMA; HCTVKDS; -.
DR OrthoDB; 645776at2759; -.
DR PhylomeDB; B4LS82; -.
DR Proteomes; UP000008792; Unassembled WGS sequence.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.
DR InterPro; IPR028802; SMG8.
DR InterPro; IPR019354; SMG8/SMG9.
DR PANTHER; PTHR13091; PTHR13091; 1.
DR Pfam; PF10220; Smg8_Smg9; 1.
PE 3: Inferred from homology;
KW Nonsense-mediated mRNA decay; Reference proteome.
FT CHAIN 1..962
FT /note="Nonsense-mediated mRNA decay factor SMG8"
FT /id="PRO_0000378180"
FT REGION 634..661
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 962 AA; 108301 MW; 4B04C8CA9BCDE700 CRC64;
MSYKNYYTWK YPDIPEHVAP LLLELQNSLV IVGIIGRSKC AQANKMSAFG MQPDKTHEPA
DGQILCYYKP GTNMLLLHFE TTHDEAVLGQ QLLKQTSVDF DSFYEQMRSR FLRMLLLALH
VCHILVYVET AQTFDTTLVT ICQLLKYVRE KHVLDFLPQM LRETAAGSLL SDRARLCTPR
VLFLFENYPQ DEEKSRERIS AYEFQTEDKI YELLRQYNIV TNNANNSLFA LPNNKQFVFY
NAHEKLRPDQ LLLAIEALNA TMYKSDSKEE EEDTEILELA PFEGFVKPYG AGYEARESDE
QLYRKKHTVW HFLQRHVQDA LQGCFDEGSF KQLPQSAQFQ LLGVNDWHIC MDTIHRLLIG
NIQEVSYVTN NQNYKAYLRD FNESLNYEKK FWGHLCDLGL KKGISAYKSS APAIYGSVTH
RQLLADAILA FEEEGRGPYA ELALAKLSEI CLRHWHDGRQ QCEQLSLRGN PCTQPKDAPH
DKHSSGIVHI SSCNCGRTQG RREDPFTLRQ ANYDYYEHMA AMCNLCVKVK KFQLPVFTPS
ISDYRAAAFE AAFPLLLQAA KNRTEIATGG DSDLEAAGEL YSQPINATEQ APQKPQITLS
NGCSQPALSA TYGSDLNMSI AGFGASLNEG EEVRSPEISS QIASSGLSSR SNSTSSGTSS
ANTANELVLQ LKERTDQNAA NAAVSEICPE ALPIVASTEQ VSTTEYLPGL VHMSSGCELL
PLFPSWSLAC VGPSSIYSHN TGLQEHFQSG FLSGANFLLP WDVHVRLVQP HKHPQQQQQS
MGKKSQRYRK HGDRLALKIF VGFEYECSRG HRFMMCSPDR VLRGGADIER DTSSKVVNNN
MPLYFPCPCR AQPTYLAQLM RIHVVTPKAP VNIILDPKMC VGKYTFTLGC PTLPRLSQSA
YWILRLPYVY QGDNVLITPP ERLEPDDNMA SGCLLAGMFG IAETDTNETN QQAITPLTFT
RL