SMG8_DROYA
ID SMG8_DROYA Reviewed; 950 AA.
AC B4P0U1;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 51.
DE RecName: Full=Nonsense-mediated mRNA decay factor SMG8 {ECO:0000250|UniProtKB:Q8ND04};
DE AltName: Full=Protein smg-8 homolog;
GN ORFNames=GE13372;
OS Drosophila yakuba (Fruit fly).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC Drosophilidae; Drosophila; Sophophora.
OX NCBI_TaxID=7245;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tai18E2 / Tucson 14021-0261.01;
RX PubMed=17994087; DOI=10.1038/nature06341;
RG Drosophila 12 genomes consortium;
RT "Evolution of genes and genomes on the Drosophila phylogeny.";
RL Nature 450:203-218(2007).
CC -!- FUNCTION: Involved in nonsense-mediated decay (NMD) of mRNAs containing
CC premature stop codons. Probable component of kinase complex containing
CC nonC and recruited to stalled ribosomes (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SMG8 family. {ECO:0000305}.
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DR EMBL; CM000157; EDW87986.1; -; Genomic_DNA.
DR RefSeq; XP_002088274.1; XM_002088238.2.
DR AlphaFoldDB; B4P0U1; -.
DR SMR; B4P0U1; -.
DR STRING; 7245.FBpp0258382; -.
DR EnsemblMetazoa; FBtr0259890; FBpp0258382; FBgn0231051.
DR GeneID; 6527180; -.
DR KEGG; dya:Dyak_GE13372; -.
DR eggNOG; KOG3692; Eukaryota.
DR HOGENOM; CLU_008116_0_0_1; -.
DR OMA; HCTVKDS; -.
DR OrthoDB; 645776at2759; -.
DR PhylomeDB; B4P0U1; -.
DR Proteomes; UP000002282; Chromosome 2L.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.
DR InterPro; IPR028802; SMG8.
DR InterPro; IPR019354; SMG8/SMG9.
DR PANTHER; PTHR13091; PTHR13091; 1.
DR Pfam; PF10220; Smg8_Smg9; 1.
PE 3: Inferred from homology;
KW Nonsense-mediated mRNA decay.
FT CHAIN 1..950
FT /note="Nonsense-mediated mRNA decay factor SMG8"
FT /id="PRO_0000378182"
FT REGION 560..607
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 624..651
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 570..584
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 587..607
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 950 AA; 107692 MW; AD2F3F457E19F360 CRC64;
MMKDYYTWTY PDIPENVSQE LRQLKSSLVV VGIVGRSKCD QANKMQAFGM EPPIEHKAKE
GQVQCYYKLG TSSLLLHFET TYDEAILGQM IDVCMEDVET PFDFDSFYER MRCRFVRMML
LALHACHIVV YVETGQTFDP TLVTVFQLLK FAREQHLMQF LPQMLRETPS ARMSERARLC
APRILFLFEN FPRDEPKTRE CVSAYEFQTE DCIYELLRHH NIVTNSSSSS LVALPNNKQF
VFFNAHEQLH EDKLLKAIDC LNQAMYKPDA KEEEEDLEIL ELAPFEGFVK PYNLPVDDKE
LEKQQYKQDH TVWHFLQRHV QDALLGCFDE GSFKQHSQQG QFQLLNIHEW HNYMATLHKL
LVENAKDPNQ ETSNEDYKLF LKSFDESLNY EKKFWAHLCE LGLKKGIAAY KNAAPANYGN
STHRQLLADA TVAFEEEGRG PQAKAALAKM AAICQKHWQD GRQQCEQLSL RSHPCTLPKN
LPHEKHNSGV IHISSCNCGR TQGRREDPFN LRQANYEFYE HIAQMCNLCV KVKQYQLPIF
EPSVSDYRAA AFEAAFPLLH TGKSGAPQDE DGEEDAEDEE GQEQQQPAEE QRQNTASNGC
SQPLSPTFGS DLNMSIAGFG ASLNESQASS EQLSNSEQNS TSSGTSSADT ENELVVELQE
LHAKKEARDD AGPADAFSTS TTEYLPGLVH TVSNFGLLPL FPSWSLACVG PSSIYSHNTG
LQEHFQSGFL SGANFLLPWD VQLRLVHAPK QQHHTHHQQQ HLGKKQQRWK KQGDRLSLKI
FVGMEYECSR GHRFMMCAPD RVLRGGADIE RETCSKVVHN NMPLYYPCPC RSQTSYLAQL
MRIHVVTPKA PVNIIVDPKV CVGKGKYTFT LGSIVPPRLS QSAYWIIRLP YVYQGDDVLI
APPEKLEPDD PLAGGYLLPG MFGVAETDPT LDLNEPGRMG ASAAGNFTRI