BIN3D_ARATH
ID BIN3D_ARATH Reviewed; 318 AA.
AC Q6NPC9; Q9LU61;
DT 28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Probable RNA methyltransferase At5g51130;
DE EC=2.1.1.-;
GN OrderedLocusNames=At5g51130; ORFNames=MWD22.7;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis cDNA clones.";
RL Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Shinn P., Chen H., Cheuk R., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probable RNA methyltransferase. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the methyltransferase superfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA97375.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB023044; BAA97375.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED96041.1; -; Genomic_DNA.
DR EMBL; BT010868; AAR24235.1; -; mRNA.
DR EMBL; BT010996; AAR24774.1; -; mRNA.
DR RefSeq; NP_568752.1; NM_124492.3.
DR AlphaFoldDB; Q6NPC9; -.
DR SMR; Q6NPC9; -.
DR STRING; 3702.AT5G51130.1; -.
DR PaxDb; Q6NPC9; -.
DR PRIDE; Q6NPC9; -.
DR ProteomicsDB; 240667; -.
DR EnsemblPlants; AT5G51130.1; AT5G51130.1; AT5G51130.
DR GeneID; 835187; -.
DR Gramene; AT5G51130.1; AT5G51130.1; AT5G51130.
DR KEGG; ath:AT5G51130; -.
DR Araport; AT5G51130; -.
DR TAIR; locus:2176217; AT5G51130.
DR eggNOG; KOG2899; Eukaryota.
DR HOGENOM; CLU_004729_2_0_1; -.
DR InParanoid; Q6NPC9; -.
DR OMA; ELFRGKQ; -.
DR OrthoDB; 1185441at2759; -.
DR PRO; PR:Q6NPC9; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q6NPC9; baseline and differential.
DR Genevisible; Q6NPC9; AT.
DR GO; GO:0008171; F:O-methyltransferase activity; IBA:GO_Central.
DR GO; GO:0008173; F:RNA methyltransferase activity; IBA:GO_Central.
DR GO; GO:0017069; F:snRNA binding; IBA:GO_Central.
DR GO; GO:0040031; P:snRNA modification; IBA:GO_Central.
DR Gene3D; 3.40.50.150; -; 1.
DR InterPro; IPR039772; Bin3-like.
DR InterPro; IPR010675; Bin3_C.
DR InterPro; IPR024160; BIN3_SAM-bd_dom.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR12315; PTHR12315; 1.
DR Pfam; PF06859; Bin3; 1.
DR SUPFAM; SSF53335; SSF53335; 1.
DR PROSITE; PS51515; BIN3_SAM; 1.
PE 2: Evidence at transcript level;
KW Methyltransferase; Reference proteome; S-adenosyl-L-methionine;
KW Transferase.
FT CHAIN 1..318
FT /note="Probable RNA methyltransferase At5g51130"
FT /id="PRO_0000420473"
FT DOMAIN 82..318
FT /note="Bin3-type SAM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00848"
FT REGION 1..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 146..184
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..29
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..59
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 318 AA; 36597 MW; 21BB86132704A3ED CRC64;
MGRDNDQKKN KKKRNRSNEN EKSVEKVVAN EEKVPTQQKQ KQQQGQQGNC NQSKKKKNQE
VYPFGNYRNY YGYRISNDTD EDPRLKVLKK EWFEGKDCLD IGCNSGIMTI HIAKKFGCRS
ILGVDIDTSR IEDAHWHLRK FVRMQNSTKP SEKKSSSEGA DGVHGSKEPS VSLSNGEAKA
DSAETKDLSQ IVSFQKENFV QTRNLDDNRY DTILCLSVTK WVHLNWGDDG LITLFSKIWR
LLQPGGIFVM EPQPWKSYEN NRRVSETTAM NYRTIVLRPD RFQEILLDKI GFRTVEDLTS
SLSGASKGFD RQILAFQK