SMP1_ARATH
ID SMP1_ARATH Reviewed; 86 AA.
AC Q9LE44; A0A178VH69;
DT 17-JUN-2020, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 129.
DE RecName: Full=SEED MATURATION PROTEIN 1 {ECO:0000303|PubMed:20870712};
DE AltName: Full=Late embryogenesis abundant protein SMP1 {ECO:0000303|PubMed:22837651};
GN Name=SMP1 {ECO:0000303|PubMed:20870712};
GN OrderedLocusNames=At3g12960 {ECO:0000312|Araport:AT3G12960};
GN ORFNames=MGH6.8 {ECO:0000312|EMBL:BAB02504.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Cheuk R.F., Shinn P., Ecker J.R.;
RT "Arabidopsis cDNA clones.";
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RC STRAIN=cv. Columbia, and cv. Landsberg erecta;
RX PubMed=20870712; DOI=10.1074/jbc.m110.157008;
RA Chen T., Nayak N., Majee S.M., Lowenson J., Schaefermeyer K.R.,
RA Eliopoulos A.C., Lloyd T.D., Dinkins R., Perry S.E., Forsthoefel N.R.,
RA Clarke S.G., Vernon D.M., Zhou Z.S., Rejtar T., Downie A.B.;
RT "Substrates of the Arabidopsis thaliana protein isoaspartyl
RT methyltransferase 1 identified using phage display and biopanning.";
RL J. Biol. Chem. 285:37281-37292(2010).
RN [5]
RP FUNCTION, AND MISCELLANEOUS.
RX PubMed=22837651; DOI=10.3390/ijms13066582;
RA Kushwaha R., Lloyd T.D., Schaefermeyer K.R., Kumar S., Downie A.B.;
RT "Identification of late embryogenesis abundant (LEA) protein putative
RT interactors using phage display.";
RL Int. J. Mol. Sci. 13:6582-6603(2012).
CC -!- FUNCTION: Protein chaperone involved in seed maturation and dormancy
CC maintenance after high temperature fluctuation (e.g. secondary dormancy
CC after 3 days at 40 degrees Celsius), probably by protecting heat labile
CC proteins required for secondary dormancy (e.g. G6PDH, HOP3, SR45,
CC ECP63, SCL33, RPL32B, ChlADR1, MSBP1, MBF1B, At3g01690, At1g15280,
CC At1g15290, At2g31410, At1g11630, At1g65090, EMB2279, EMB1674 and
CC RPL35C). {ECO:0000269|PubMed:20870712, ECO:0000269|PubMed:22837651}.
CC -!- DISRUPTION PHENOTYPE: Increased seed germination rate after high
CC temperature fluctuation due to a reduced seed dormancy; fail to enter
CC secondary dormancy after 3 days at 40 degrees Celsius.
CC {ECO:0000269|PubMed:20870712}.
CC -!- MISCELLANEOUS: Boiling-stable protein. {ECO:0000269|PubMed:22837651}.
CC -!- SIMILARITY: Belongs to the LEA type 3 family. {ECO:0000305}.
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DR EMBL; AB026645; BAB02504.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75267.1; -; Genomic_DNA.
DR EMBL; BT014911; AAT46040.1; -; mRNA.
DR EMBL; BT015752; AAU84689.1; -; mRNA.
DR RefSeq; NP_187902.1; NM_112133.4.
DR AlphaFoldDB; Q9LE44; -.
DR STRING; 3702.AT3G12960.1; -.
DR PaxDb; Q9LE44; -.
DR PRIDE; Q9LE44; -.
DR ProMEX; Q9LE44; -.
DR ProteomicsDB; 179200; -.
DR DNASU; 820482; -.
DR EnsemblPlants; AT3G12960.1; AT3G12960.1; AT3G12960.
DR GeneID; 820482; -.
DR Gramene; AT3G12960.1; AT3G12960.1; AT3G12960.
DR KEGG; ath:AT3G12960; -.
DR Araport; AT3G12960; -.
DR TAIR; locus:2089265; AT3G12960.
DR eggNOG; ENOG502S78Z; Eukaryota.
DR HOGENOM; CLU_165774_2_0_1; -.
DR InParanoid; Q9LE44; -.
DR OMA; IRVSYKH; -.
DR OrthoDB; 1618903at2759; -.
DR PhylomeDB; Q9LE44; -.
DR PRO; PR:Q9LE44; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LE44; baseline and differential.
DR GO; GO:0044183; F:protein folding chaperone; IDA:UniProtKB.
DR GO; GO:0010231; P:maintenance of seed dormancy; IMP:UniProtKB.
DR GO; GO:0009408; P:response to heat; IMP:UniProtKB.
DR GO; GO:0010162; P:seed dormancy process; IMP:TAIR.
DR InterPro; IPR044984; SMP1.
DR PANTHER; PTHR37732; PTHR37732; 1.
PE 3: Inferred from homology;
KW Chaperone; Developmental protein; Reference proteome; Stress response.
FT CHAIN 1..86
FT /note="SEED MATURATION PROTEIN 1"
FT /id="PRO_0000450285"
FT REGION 52..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 53..69
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 70..86
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 86 AA; 9464 MW; 1EE66D71919B618D CRC64;
MAKNKDDIKY ATAQAKLSED EAIRVSYKHG TPLEGGKIAE SEPVELFSSA QRIEKGKEQS
AASGDQTQIQ RDIKDIKGTR TDDSPR