SMXL5_ARATH
ID SMXL5_ARATH Reviewed; 1028 AA.
AC Q9LU73; Q93YT8;
DT 16-MAR-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Protein SMAX1-LIKE 5 {ECO:0000303|PubMed:23893171};
DE Short=AtSMXL5 {ECO:0000303|PubMed:23893171};
GN Name=SMXL5 {ECO:0000303|PubMed:23893171};
GN OrderedLocusNames=At5g57130 {ECO:0000312|Araport:AT5G57130};
GN ORFNames=MUL3.8 {ECO:0000312|EMBL:BAA97363.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 93-1028.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=23893171; DOI=10.1104/pp.113.221259;
RA Stanga J.P., Smith S.M., Briggs W.R., Nelson D.C.;
RT "SUPPRESSOR OF MORE AXILLARY GROWTH2 1 controls seed germination and
RT seedling development in Arabidopsis.";
RL Plant Physiol. 163:318-330(2013).
RN [5]
RP REVIEW.
RX PubMed=25179782; DOI=10.1016/j.pbi.2014.08.001;
RA Bennett T., Leyser O.;
RT "Strigolactone signalling: standing on the shoulders of DWARFs.";
RL Curr. Opin. Plant Biol. 22:7-13(2014).
CC -!- FUNCTION: May function in a transcriptional corepressor complex.
CC {ECO:0000250|UniProtKB:Q9FHH2}.
CC -!- SUBUNIT: Interacts probably with TPL/TPR in an EAR-motif dependent
CC manner. {ECO:0000250|UniProtKB:Q9FHH2}.
CC -!- TISSUE SPECIFICITY: Detected in roots, seedlings and axillary branches.
CC {ECO:0000269|PubMed:23893171}.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAL24119.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB023042; BAA97363.1; -; Genomic_DNA.
DR EMBL; CP002688; AED96851.1; -; Genomic_DNA.
DR EMBL; AY059771; AAL24119.1; ALT_INIT; mRNA.
DR EMBL; BT004338; AAO42332.1; -; mRNA.
DR RefSeq; NP_568849.2; NM_125095.4.
DR AlphaFoldDB; Q9LU73; -.
DR STRING; 3702.AT5G57130.1; -.
DR iPTMnet; Q9LU73; -.
DR PaxDb; Q9LU73; -.
DR PRIDE; Q9LU73; -.
DR ProteomicsDB; 232567; -.
DR EnsemblPlants; AT5G57130.1; AT5G57130.1; AT5G57130.
DR GeneID; 835819; -.
DR Gramene; AT5G57130.1; AT5G57130.1; AT5G57130.
DR KEGG; ath:AT5G57130; -.
DR Araport; AT5G57130; -.
DR TAIR; locus:2175589; AT5G57130.
DR eggNOG; KOG1051; Eukaryota.
DR HOGENOM; CLU_006575_0_0_1; -.
DR InParanoid; Q9LU73; -.
DR OMA; NGWIMIE; -.
DR OrthoDB; 352341at2759; -.
DR PhylomeDB; Q9LU73; -.
DR PRO; PR:Q9LU73; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LU73; baseline and differential.
DR GO; GO:0033500; P:carbohydrate homeostasis; IGI:TAIR.
DR GO; GO:0010233; P:phloem transport; IGI:TAIR.
DR Gene3D; 1.10.1780.10; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF02861; Clp_N; 1.
DR SUPFAM; SSF81923; SSF81923; 1.
DR PROSITE; PS51903; CLP_R; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat; Transcription; Transcription regulation.
FT CHAIN 1..1028
FT /note="Protein SMAX1-LIKE 5"
FT /id="PRO_0000435714"
FT DOMAIN 8..199
FT /note="Clp R"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 12..102
FT /note="Repeat 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 116..199
FT /note="Repeat 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT MOTIF 871..875
FT /note="EAR"
FT /evidence="ECO:0000305"
SQ SEQUENCE 1028 AA; 115218 MW; 037B6A1C88DE31E5 CRC64;
MRTGGYTIQQ TLTTEAASVL KHSLTLARRR GHAQVTPLHV AATLLSSRTS LLRRACIKSH
PGFSTNYQFA PSRLQHHHHH NQNHPLQCRA LELCFNVALN RLPTVPGPMF HGQPSLANAL
VAALKRAQAH QRRGCIEQQQ QTQTHPQTQQ TQLLAVKVEL EQLVISILDD PSVSRVMREA
GFNSTAVKSC VEDCSVSSVF YGGSAVGVFS SPNSPDQQQQ HHNSINRLHH YQNPKDFNFI
NPNFPLWQTH FLNQSPDQNP LLLSSSASHH HQQQRLREID LKLVVDVLMR KKTKKKNPVI
VGDSISFTEG FVSELMAKLE RGEIDQTGEL KQTHFVKFHF SPMASKFMRR EDVELNIKEL
RKKVLSLTTS GKNAIIFTGD LKWTVKEITN NNSGGINEIS SSYSPLDHLV EEIGKLITEC
NDDGDDDDCK TRKVWVMGTA SFQTYMRCQM RQPSLETLWA LHPVSVPSSA NLGLSLHATS
GHEARNMSTV NATKSLSGYD KAEEEETISH VLSCCPECVT SFDREAKSLK ANQDKLLPSW
LQSHDADSSS QKDELMGLKR KWNRFCETLH NQTGQLSMMG NYPYGLPYGS SHESSKSTSL
IDSLGLKPNQ RATNSIAKFR RQNSCTIEFD LGGNEHEKGE SINEAEDDKG NETVTLDLGR
SLFRSDSVTD TRLKLSALVK ALEESIPRQT VTMRLIAESL MDCVSKKKDS WIIIEGRDTT
AKRRVARTVS ESVFGSFESL VHIDLKKKGN ESKASPATLL AYELKNPEKV VFLIEDIDLA
DSRFLKLLAD RFEDKRRIKT GIDHRQAIFI LTKEDSRNVR NRDSVLQIGL EITAQSPGKK
RKPESDLSIE NGFWMKKEVC SRQSSFNSSY LDLNIKAEDE EVEGEISPIS SDLTGEEETE
FSSSSNFLNR IQNRFVLNRS CEPGIEKGMI TAAFREIFPE REEGGGVRFS VEDKLVEELY
GIQNGAFERW LKEVFQTGLL TVKKGGKKDT GVIRMVFGGI VDNKGYGGGV GGYMATFLPN
KVQVSKFE
