SNU71_CANAL
ID SNU71_CANAL Reviewed; 614 AA.
AC Q5AM84; A0A1D8PGG0; Q5ALT3;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 10-MAY-2017, sequence version 2.
DT 03-AUG-2022, entry version 69.
DE RecName: Full=U1 small nuclear ribonucleoprotein component SNU71;
GN Name=SNU71; OrderedLocusNames=CAALFM_C201820CA;
GN ORFNames=CaO19.1491, CaO19.9068;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Component of the U1 snRNP particle, which recognizes and
CC binds the 5'-splice site of pre-mRNA. Together with other non-snRNP
CC factors, U1 snRNP forms the spliceosomal commitment complex, that
CC targets pre-mRNA to the splicing pathway (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Component of the U1 snRNP particle, a subcomplex of the
CC spliceosome. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SNU71 family. {ECO:0000305}.
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DR EMBL; CP017624; AOW27225.1; -; Genomic_DNA.
DR RefSeq; XP_722539.2; XM_717446.2.
DR AlphaFoldDB; Q5AM84; -.
DR SMR; Q5AM84; -.
DR BioGRID; 1218925; 1.
DR STRING; 237561.Q5AM84; -.
DR PRIDE; Q5AM84; -.
DR GeneID; 3635831; -.
DR KEGG; cal:CAALFM_C201820CA; -.
DR CGD; CAL0000187181; orf19.9068.
DR VEuPathDB; FungiDB:C2_01820C_A; -.
DR eggNOG; KOG2253; Eukaryota.
DR HOGENOM; CLU_478950_0_0_1; -.
DR InParanoid; Q5AM84; -.
DR OrthoDB; 1314856at2759; -.
DR PRO; PR:Q5AM84; -.
DR Proteomes; UP000000559; Chromosome 2.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR InterPro; IPR002483; PWI_dom.
DR Pfam; PF01480; PWI; 1.
PE 3: Inferred from homology;
KW Coiled coil; Cytoplasm; mRNA processing; mRNA splicing; Nucleus;
KW Reference proteome; Ribonucleoprotein; RNA-binding; Spliceosome.
FT CHAIN 1..614
FT /note="U1 small nuclear ribonucleoprotein component SNU71"
FT /id="PRO_0000333455"
FT REGION 69..98
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 473..526
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 301..327
FT /evidence="ECO:0000255"
FT COILED 450..479
FT /evidence="ECO:0000255"
FT COMPBIAS 75..89
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 477..523
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 614 AA; 70502 MW; 91E2D6F7CC5055A2 CRC64;
MTAGDNSIEY VNPYSLSQTI NSDLISILDP NGSTTSIIKP QLNYQIPIFK SIDVSNLIDL
NNTKIQTQTN ETRINKAKDS SDDHQNNPSS KDYDTSGENI VGGIDDIVED IKLYVSIDKL
KPENFQNQLT TIIINQFPTN LKSNLIEQLL KMLMNLKKFV WSFINHELID LKLIFIKFDQ
LKDLKWFLLT YCDHISQLIP NVTIITNDKV NEYLNNNKDS SLAKVEPSKI TDNLKAKINL
IINNPINYTK GKKNSGTEDL DQVLDSYSNY KVDNNDLIDI PNNMKENIIK DIIRFRSRML
LIEKEQRKKE IEMERIKTKN KLKELFEGIK ENSTDSTTRK ATNKAAVGVT ISPKVSHRDE
YEDMNDKEYE EFIAVEERNK LNDQYNKKLK SFQNNQHAEY MKLTNKLKSL QNYESDLIDN
KLKYIDNLKN YQTNGLAHLY THNYSDYLRM RSQKRSLEET KDAEDVKQEL EEIKKNGGQV
ASTNTNTNTK PSTYSSGVSE LATTSVETPK STTTTTTTND TTDEPVAKKS KLAKEIIIID
LPPTVKQSLQ EKIVELVENS LGIKDEFLIQ VINENLEASN LDNKQELIDE LVQVLDEDAE
SLVNELWDYI ETMV