SNU71_DEBHA
ID SNU71_DEBHA Reviewed; 609 AA.
AC Q6BXC3;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 25-MAY-2022, entry version 72.
DE RecName: Full=U1 small nuclear ribonucleoprotein component SNU71;
GN Name=SNU71; OrderedLocusNames=DEHA2B04246g;
OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990
OS / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Debaryomyces.
OX NCBI_TaxID=284592;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: Component of the U1 snRNP particle, which recognizes and
CC binds the 5'-splice site of pre-mRNA. Together with other non-snRNP
CC factors, U1 snRNP forms the spliceosomal commitment complex, that
CC targets pre-mRNA to the splicing pathway (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Component of the U1 snRNP particle, a subcomplex of the
CC spliceosome. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SNU71 family. {ECO:0000305}.
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DR EMBL; CR382134; CAG85140.2; -; Genomic_DNA.
DR RefSeq; XP_457146.2; XM_457146.1.
DR AlphaFoldDB; Q6BXC3; -.
DR SMR; Q6BXC3; -.
DR EnsemblFungi; CAG85140; CAG85140; DEHA2B04246g.
DR GeneID; 2913220; -.
DR KEGG; dha:DEHA2B04246g; -.
DR VEuPathDB; FungiDB:DEHA2B04246g; -.
DR eggNOG; ENOG502S6GF; Eukaryota.
DR HOGENOM; CLU_467770_0_0_1; -.
DR InParanoid; Q6BXC3; -.
DR OMA; NTITRHY; -.
DR OrthoDB; 1314856at2759; -.
DR Proteomes; UP000000599; Chromosome B.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR InterPro; IPR002483; PWI_dom.
DR Pfam; PF01480; PWI; 1.
PE 3: Inferred from homology;
KW Coiled coil; Cytoplasm; mRNA processing; mRNA splicing; Nucleus;
KW Reference proteome; Ribonucleoprotein; RNA-binding; Spliceosome.
FT CHAIN 1..609
FT /note="U1 small nuclear ribonucleoprotein component SNU71"
FT /id="PRO_0000333457"
FT COILED 308..350
FT /evidence="ECO:0000255"
FT COILED 470..507
FT /evidence="ECO:0000255"
SQ SEQUENCE 609 AA; 71196 MW; 9D910CBD2A319B22 CRC64;
MQNNSKLNLP YMLNPNHSSN DFVTSVTPFT VSSNNNKKLF SILKPIPGWN SITSPDKTTL
ITNSALSVPI YKDLDVTDII ESNNSKLLAR NQIASTTKTF NNVEISNASD QDNDQMEIDT
DPEQYINIEE FIPKTLKDQI NTLTITNFPN VKKIAIEKIF KTLLIYNPHD TSFTWSAIGD
DHIDNRLVFI RFSGVESLKW FLGNLSYIVH QIFENITINA DPASKSYLDD EKEDSDGLNE
SQIENITYEI SKILQNRKNY EKLSKTTGTE DLDQVMQYYN TYKVDPMELI EVPKDMKEKI
VNDIIKFRSK VLSIEKNRRK QEIENERMQA KNRLKRIFEG IKETNDEIEL DNDNDMKEAV
DNNQGTYIEF EELSEEEYNA LLSKREQEIL EEQYQEKLIR FRESESIEKK NLLDKLNTVK
NYEDYLILNK AKFIEEMKDF HDYDLSNINQ LVSLNPTKIK QYYNNYSEYL KMRTQERMNE
EKSDRKDLEE EQEELQAMNK ASEFLSSFVP KPEHKTQATT QFKDLSANNI QVSQFNSNKL
SSLHNKIGQL IEEYLGIRED VLIKFIYDFI LSNGLKSKEE LIEELSEPLD EDSIIVVNEI
WEHIDELAK