SOFL3_ARATH
ID SOFL3_ARATH Reviewed; 128 AA.
AC F4J6N7; A0A178VCC2; Q9LW41;
DT 17-JUN-2020, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 03-AUG-2022, entry version 57.
DE RecName: Full=Protein SOB FIVE-LIKE 3 {ECO:0000303|PubMed:29467189};
DE Short=AtSOFL3 {ECO:0000303|PubMed:29467189};
GN Name=SOFL3 {ECO:0000303|PubMed:29467189};
GN OrderedLocusNames=At3g30580 {ECO:0000312|Araport:AT3G30580};
GN ORFNames=MQP15.8 {ECO:0000312|EMBL:BAB01024.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=29467189; DOI=10.1534/g3.118.200040;
RA Tayengwa R., Zhao J., Pierce C.F., Werner B.E., Neff M.M.;
RT "Synopsis of the SOFL plant-specific gene family.";
RL G3 (Bethesda) 8:1281-1290(2018).
CC -!- FUNCTION: Involved in cytokinin-mediated development.
CC {ECO:0000250|UniProtKB:Q67YG7}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:Q67YG7}. Nucleus
CC {ECO:0000250|UniProtKB:Q67YG7, ECO:0000255|PROSITE-ProRule:PRU00768}.
CC -!- TISSUE SPECIFICITY: Expressed in seedlings, roots, flowers and
CC siliques. {ECO:0000269|PubMed:29467189}.
CC -!- DOMAIN: Domains SOFL-A and SOFL-B are required for function in
CC cytokinin-mediated development. {ECO:0000250|UniProtKB:Q9CA45}.
CC -!- SIMILARITY: Belongs to the SOFL plant protein family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB01024.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB016878; BAB01024.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE77651.1; -; Genomic_DNA.
DR RefSeq; NP_189679.1; NM_113959.2.
DR AlphaFoldDB; F4J6N7; -.
DR STRING; 3702.AT3G30580.1; -.
DR PaxDb; F4J6N7; -.
DR PRIDE; F4J6N7; -.
DR EnsemblPlants; AT3G30580.1; AT3G30580.1; AT3G30580.
DR GeneID; 822772; -.
DR Gramene; AT3G30580.1; AT3G30580.1; AT3G30580.
DR KEGG; ath:AT3G30580; -.
DR Araport; AT3G30580; -.
DR TAIR; locus:2092645; AT3G30580.
DR eggNOG; ENOG502S95J; Eukaryota.
DR HOGENOM; CLU_111434_1_0_1; -.
DR InParanoid; F4J6N7; -.
DR OMA; YSHRIDD; -.
DR OrthoDB; 1561350at2759; -.
DR PRO; PR:F4J6N7; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; F4J6N7; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0009691; P:cytokinin biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0009690; P:cytokinin metabolic process; ISS:UniProtKB.
DR GO; GO:0009736; P:cytokinin-activated signaling pathway; ISS:UniProtKB.
DR InterPro; IPR044670; SOFL.
DR PANTHER; PTHR33347; PTHR33347; 1.
PE 2: Evidence at transcript level;
KW Cytokinin biosynthesis; Cytokinin signaling pathway; Cytoplasm; Nucleus;
KW Reference proteome.
FT CHAIN 1..128
FT /note="Protein SOB FIVE-LIKE 3"
FT /id="PRO_0000450251"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 54..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 11..16
FT /note="SOFL-A"
FT /evidence="ECO:0000305|PubMed:29467189"
FT MOTIF 59..68
FT /note="SOFL-B"
FT /evidence="ECO:0000305|PubMed:29467189"
FT MOTIF 111..118
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00768"
FT COMPBIAS 59..73
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 74..115
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 128 AA; 14900 MW; 5884E0EB4CF3535D CRC64;
MEREECSSSE SGWTTYISSR MEEEEEEVID EVYYEGHIIE KDRRKYANEY EINKDSDDSM
ASDASSGPSY HQTSNRGKRR EGLALRNGKG ESNDVYSHRI DDKNIGNLIS RKKEKKKSEN
KSRSHKKK
