SOLH2_RAT
ID SOLH2_RAT Reviewed; 462 AA.
AC Q3MHT3;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 25-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2;
GN Name=Sohlh2;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Probable transcription factor, which may be involved in
CC spermatogenesis and oogenesis. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
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DR EMBL; BC104697; AAI04698.1; -; mRNA.
DR RefSeq; NP_001030133.1; NM_001034961.1.
DR AlphaFoldDB; Q3MHT3; -.
DR SMR; Q3MHT3; -.
DR STRING; 10116.ENSRNOP00000049772; -.
DR PaxDb; Q3MHT3; -.
DR PRIDE; Q3MHT3; -.
DR Ensembl; ENSRNOT00000044424; ENSRNOP00000049772; ENSRNOG00000038091.
DR GeneID; 619575; -.
DR KEGG; rno:619575; -.
DR UCSC; RGD:1589577; rat.
DR CTD; 54937; -.
DR RGD; 1589577; Sohlh2.
DR eggNOG; ENOG502S71C; Eukaryota.
DR GeneTree; ENSGT00390000016050; -.
DR HOGENOM; CLU_056118_0_0_1; -.
DR InParanoid; Q3MHT3; -.
DR OMA; NIVVKYW; -.
DR OrthoDB; 643083at2759; -.
DR PhylomeDB; Q3MHT3; -.
DR TreeFam; TF336841; -.
DR PRO; PR:Q3MHT3; -.
DR Proteomes; UP000002494; Chromosome 2.
DR Bgee; ENSRNOG00000038091; Expressed in testis.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; ISO:RGD.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0042802; F:identical protein binding; ISO:RGD.
DR GO; GO:0046982; F:protein heterodimerization activity; ISO:RGD.
DR GO; GO:0042803; F:protein homodimerization activity; ISO:RGD.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; ISO:RGD.
DR GO; GO:1990837; F:sequence-specific double-stranded DNA binding; ISO:RGD.
DR GO; GO:0030154; P:cell differentiation; ISO:RGD.
DR GO; GO:0009994; P:oocyte differentiation; ISO:RGD.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISO:RGD.
DR GO; GO:0001545; P:primary ovarian follicle growth; ISO:RGD.
DR GO; GO:0010468; P:regulation of gene expression; ISO:RGD.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0007283; P:spermatogenesis; ISO:RGD.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR032669; SOHLH2.
DR PANTHER; PTHR16223:SF16; PTHR16223:SF16; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Differentiation; DNA-binding; Nucleus; Oogenesis;
KW Reference proteome; Spermatogenesis; Transcription;
KW Transcription regulation.
FT CHAIN 1..462
FT /note="Spermatogenesis- and oogenesis-specific basic helix-
FT loop-helix-containing protein 2"
FT /id="PRO_0000315702"
FT DOMAIN 200..251
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 422..462
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 462 AA; 50669 MW; 589BADC7ED81958F CRC64;
MADRISTGEL GRRPGQGRVD LLLVGDATRY FLAGSVQKFF SSTAQITLTI SNVKKVAALL
AANSFDIIFL KVTSTLTAEE QEAVRLIRSG KKKNTHLLFA FVIPEKLRGY ISDYGADISF
NEPLTLEKVN TVINYWKTYF TNTDMGNTEL PPECRLYFQT SCSELGGHFP TDLFLCSELL
NNDTGLGLKA PLSSPERNKK ASFLHSSKEK LRRERIKFCC EQLRTLLPYV KGRKSDVASV
IEATVDYVKQ VRESLSPAIM AQITESLQSN KRFSKRQMPI ELFLPCTATS QRGDAMLTSA
FSPVQEIQLL ADQGLNVYSM PAAGGPLEEA VRGQPGSVSE DLYKTRVPST TLSLNSFHAV
RYCSGPVSPH EAAARTNQNI SIYLPPTGPS VSSFTPQHCN AMLCPTRPAS SSCLCTSGHE
LPASSRTASS SIFRGFRESD SGHQASQQPT GPSLQPQDSS YF