SP1L3_ARATH
ID SP1L3_ARATH Reviewed; 122 AA.
AC Q9S7P8;
DT 13-JUN-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 106.
DE RecName: Full=Protein SPIRAL1-like 3;
GN Name=SP1L3; OrderedLocusNames=At3g02180; ORFNames=F14P3.17, F1C9.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY.
RA Nakajima K., Kawamura T., Furutani I., Hashimoto T.;
RT "Functional analysis of SPIRAL1-LIKE genes.";
RL (In) Proceedings of the 13th international conference on Arabidopsis
RL research, abstract#7-28, Seville (2002).
RN [6]
RP FUNCTION, TISSUE SPECIFICITY, AND GENE FAMILY.
RX PubMed=16478750; DOI=10.1093/pcp/pcj020;
RA Nakajima K., Kawamura T., Hashimoto T.;
RT "Role of the SPIRAL1 gene family in anisotropic growth of Arabidopsis
RT thaliana.";
RL Plant Cell Physiol. 47:513-522(2006).
RN [7]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-73, AND IDENTIFICATION BY
RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=19376835; DOI=10.1104/pp.109.138677;
RA Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A.,
RA Grossmann J., Gruissem W., Baginsky S.;
RT "Large-scale Arabidopsis phosphoproteome profiling reveals novel
RT chloroplast kinase substrates and phosphorylation networks.";
RL Plant Physiol. 150:889-903(2009).
CC -!- FUNCTION: Acts redundantly with SPR1 in maintaining the cortical
CC microtubules organization essential for anisotropic cell growth.
CC {ECO:0000269|PubMed:16478750}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q9S7P8-1; Sequence=Displayed;
CC -!- TISSUE SPECIFICITY: Ubiquitous. Preferentially expressed in above-
CC ground organs. {ECO:0000269|PubMed:16478750}.
CC -!- SIMILARITY: Belongs to the SPIRAL1 family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC009755; AAF02119.1; -; Genomic_DNA.
DR EMBL; AC011664; AAF14820.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE73773.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE73774.1; -; Genomic_DNA.
DR EMBL; AY045878; AAK76552.1; -; mRNA.
DR EMBL; AY117217; AAM51292.1; -; mRNA.
DR EMBL; AY086253; AAM64327.1; -; mRNA.
DR RefSeq; NP_566166.1; NM_111085.4. [Q9S7P8-1]
DR RefSeq; NP_974209.1; NM_202480.3. [Q9S7P8-1]
DR AlphaFoldDB; Q9S7P8; -.
DR STRING; 3702.AT3G02180.2; -.
DR iPTMnet; Q9S7P8; -.
DR PaxDb; Q9S7P8; -.
DR PRIDE; Q9S7P8; -.
DR ProteomicsDB; 232520; -. [Q9S7P8-1]
DR EnsemblPlants; AT3G02180.1; AT3G02180.1; AT3G02180. [Q9S7P8-1]
DR EnsemblPlants; AT3G02180.2; AT3G02180.2; AT3G02180. [Q9S7P8-1]
DR GeneID; 821277; -.
DR Gramene; AT3G02180.1; AT3G02180.1; AT3G02180. [Q9S7P8-1]
DR Gramene; AT3G02180.2; AT3G02180.2; AT3G02180. [Q9S7P8-1]
DR KEGG; ath:AT3G02180; -.
DR Araport; AT3G02180; -.
DR TAIR; locus:2076537; AT3G02180.
DR HOGENOM; CLU_129558_0_0_1; -.
DR InParanoid; Q9S7P8; -.
DR PhylomeDB; Q9S7P8; -.
DR PRO; PR:Q9S7P8; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9S7P8; baseline and differential.
DR Genevisible; Q9S7P8; AT.
DR GO; GO:0010005; C:cortical microtubule, transverse to long axis; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0043622; P:cortical microtubule organization; IBA:GO_Central.
DR InterPro; IPR039613; SPR1/2/3/4/5.
DR PANTHER; PTHR33403; PTHR33403; 1.
PE 1: Evidence at protein level;
KW Alternative splicing; Microtubule; Phosphoprotein; Reference proteome.
FT CHAIN 1..122
FT /note="Protein SPIRAL1-like 3"
FT /id="PRO_0000417955"
FT REGION 1..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 96..122
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..78
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 73
FT /note="Phosphoserine"
FT /evidence="ECO:0007744|PubMed:19376835"
SQ SEQUENCE 122 AA; 12172 MW; 68663801FE800082 CRC64;
MGKARGVNNG VNESSLGYLF GSGQPSSAAA ATMGTTTTTT TTTTTDGTGG RPITTTTTTV
TDNKKTSAGV RGSPNNYFRS EGQNCGNFLT DRPSTKVHAA PGGGSSLDYL FGGPSPAGSG
NK
