SP1L3_ORYSJ
ID SP1L3_ORYSJ Reviewed; 101 AA.
AC Q2QQ99; A0A0N7KU28;
DT 13-JUN-2012, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=Protein SPIRAL1-like 3;
GN OrderedLocusNames=Os12g0502000, LOC_Os12g31780; ORFNames=OsJ_36193;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Acts in maintaining the cortical microtubules organization
CC essential for anisotropic cell growth. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SPIRAL1 family. {ECO:0000305}.
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DR EMBL; DP000011; ABA98636.1; -; Genomic_DNA.
DR EMBL; AP008218; BAF29844.1; -; Genomic_DNA.
DR EMBL; AP014968; BAT17258.1; -; Genomic_DNA.
DR EMBL; CM000149; EAZ20584.1; -; Genomic_DNA.
DR EMBL; AK060063; BAG87297.1; -; mRNA.
DR RefSeq; XP_015619869.1; XM_015764383.1.
DR AlphaFoldDB; Q2QQ99; -.
DR STRING; 4530.OS12T0502000-01; -.
DR PaxDb; Q2QQ99; -.
DR PRIDE; Q2QQ99; -.
DR EnsemblPlants; Os12t0502000-01; Os12t0502000-01; Os12g0502000.
DR GeneID; 4352277; -.
DR Gramene; Os12t0502000-01; Os12t0502000-01; Os12g0502000.
DR KEGG; osa:4352277; -.
DR eggNOG; ENOG502S4KK; Eukaryota.
DR HOGENOM; CLU_129558_0_0_1; -.
DR InParanoid; Q2QQ99; -.
DR OMA; ARKFYKM; -.
DR OrthoDB; 1632388at2759; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000007752; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR Genevisible; Q2QQ99; OS.
DR GO; GO:0010005; C:cortical microtubule, transverse to long axis; IBA:GO_Central.
DR GO; GO:0043622; P:cortical microtubule organization; IBA:GO_Central.
DR InterPro; IPR039613; SPR1/2/3/4/5.
DR PANTHER; PTHR33403; PTHR33403; 1.
PE 3: Inferred from homology;
KW Microtubule; Reference proteome.
FT CHAIN 1..101
FT /note="Protein SPIRAL1-like 3"
FT /id="PRO_0000417966"
FT REGION 1..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 73..101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 101 AA; 10220 MW; B87B1C4E2162DB28 CRC64;
MGRGVSSGGG QSSLGYLFGG GEAPKSAEKP APVQKPAPSS SAEKLKEIPA GIQSSKANNY
MRAEGQNCGN FLTDRPSTKV QAAPGGGSSL DYLFSGNKDG K