SP1L4_ARATH
ID SP1L4_ARATH Reviewed; 127 AA.
AC Q9LF22; Q8LBJ3;
DT 13-JUN-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Protein SPIRAL1-like 4;
GN Name=SP1L4; OrderedLocusNames=At5g15600; ORFNames=T20K14_210;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY.
RA Nakajima K., Kawamura T., Furutani I., Hashimoto T.;
RT "Functional analysis of SPIRAL1-LIKE genes.";
RL (In) Proceedings of the 13th international conference on Arabidopsis
RL research, abstract#7-28, Seville (2002).
RN [6]
RP FUNCTION, TISSUE SPECIFICITY, AND GENE FAMILY.
RX PubMed=16478750; DOI=10.1093/pcp/pcj020;
RA Nakajima K., Kawamura T., Hashimoto T.;
RT "Role of the SPIRAL1 gene family in anisotropic growth of Arabidopsis
RT thaliana.";
RL Plant Cell Physiol. 47:513-522(2006).
CC -!- FUNCTION: Acts redundantly with SPR1 in maintaining the cortical
CC microtubules organization essential for anisotropic cell growth.
CC {ECO:0000269|PubMed:16478750}.
CC -!- TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:16478750}.
CC -!- SIMILARITY: Belongs to the SPIRAL1 family. {ECO:0000305}.
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DR EMBL; AL391143; CAC01759.1; -; Genomic_DNA.
DR EMBL; CP002688; AED92182.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM68530.1; -; Genomic_DNA.
DR EMBL; BT004163; AAO42183.1; -; mRNA.
DR EMBL; BT005051; AAO50584.1; -; mRNA.
DR EMBL; AY087175; AAM64731.1; -; mRNA.
DR PIR; T51538; T51538.
DR RefSeq; NP_001330276.1; NM_001343410.1.
DR RefSeq; NP_197064.1; NM_121564.3.
DR AlphaFoldDB; Q9LF22; -.
DR BioGRID; 16688; 2.
DR IntAct; Q9LF22; 2.
DR STRING; 3702.AT5G15600.1; -.
DR iPTMnet; Q9LF22; -.
DR PaxDb; Q9LF22; -.
DR PRIDE; Q9LF22; -.
DR ProteomicsDB; 232613; -.
DR EnsemblPlants; AT5G15600.1; AT5G15600.1; AT5G15600.
DR EnsemblPlants; AT5G15600.2; AT5G15600.2; AT5G15600.
DR GeneID; 831412; -.
DR Gramene; AT5G15600.1; AT5G15600.1; AT5G15600.
DR Gramene; AT5G15600.2; AT5G15600.2; AT5G15600.
DR KEGG; ath:AT5G15600; -.
DR Araport; AT5G15600; -.
DR TAIR; locus:2180902; AT5G15600.
DR HOGENOM; CLU_129558_0_0_1; -.
DR InParanoid; Q9LF22; -.
DR OMA; GDKNMTE; -.
DR OrthoDB; 1632388at2759; -.
DR PhylomeDB; Q9LF22; -.
DR PRO; PR:Q9LF22; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LF22; baseline and differential.
DR Genevisible; Q9LF22; AT.
DR GO; GO:0010005; C:cortical microtubule, transverse to long axis; IBA:GO_Central.
DR GO; GO:0043622; P:cortical microtubule organization; IBA:GO_Central.
DR InterPro; IPR039613; SPR1/2/3/4/5.
DR PANTHER; PTHR33403; PTHR33403; 1.
PE 2: Evidence at transcript level;
KW Microtubule; Phosphoprotein; Reference proteome.
FT CHAIN 1..127
FT /note="Protein SPIRAL1-like 4"
FT /id="PRO_0000417956"
FT REGION 1..127
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 32..98
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 80
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9S7P8"
FT CONFLICT 33
FT /note="N -> K (in Ref. 4; AAM64731)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 127 AA; 12821 MW; BA44517E4B28E01B CRC64;
MGKARGVNSG GGESSLGYLF GSGESVPKPN KPNAKTGFTT TTTTTTTTDG AGGRPKTTTT
TTTTGDKNKT EENSAGVRGS PNNYYRSDGQ NCGNFLTERP STKVHAAPGG GSSLGYLFGS
GPCGSDK
