SP1L5_ARATH
ID SP1L5_ARATH Reviewed; 99 AA.
AC Q8LGD1;
DT 13-JUN-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 25-MAY-2022, entry version 87.
DE RecName: Full=Protein SPIRAL1-like 5;
GN Name=SP1L5; OrderedLocusNames=At4g23496; ORFNames=F16G20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY.
RA Nakajima K., Kawamura T., Furutani I., Hashimoto T.;
RT "Functional analysis of SPIRAL1-LIKE genes.";
RL (In) Proceedings of the 13th international conference on Arabidopsis
RL research, abstract#7-28, Seville (2002).
RN [6]
RP TISSUE SPECIFICITY, AND GENE FAMILY.
RX PubMed=16478750; DOI=10.1093/pcp/pcj020;
RA Nakajima K., Kawamura T., Hashimoto T.;
RT "Role of the SPIRAL1 gene family in anisotropic growth of Arabidopsis
RT thaliana.";
RL Plant Cell Physiol. 47:513-522(2006).
CC -!- FUNCTION: Acts redundantly with SPR1 in maintaining the cortical
CC microtubules organization essential for anisotropic cell growth.
CC {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed exclusively in stems and flowers.
CC {ECO:0000269|PubMed:16478750}.
CC -!- SIMILARITY: Belongs to the SPIRAL1 family. {ECO:0000305}.
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DR EMBL; AL031326; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AL161559; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002687; AEE84767.1; -; Genomic_DNA.
DR EMBL; BT003955; AAO42000.1; -; mRNA.
DR EMBL; BT005054; AAO50587.1; -; mRNA.
DR EMBL; AY084337; AAM60920.1; -; mRNA.
DR RefSeq; NP_567685.1; NM_118480.4.
DR AlphaFoldDB; Q8LGD1; -.
DR STRING; 3702.AT4G23496.1; -.
DR PaxDb; Q8LGD1; -.
DR ProteomicsDB; 232614; -.
DR EnsemblPlants; AT4G23496.1; AT4G23496.1; AT4G23496.
DR GeneID; 828449; -.
DR Gramene; AT4G23496.1; AT4G23496.1; AT4G23496.
DR KEGG; ath:AT4G23496; -.
DR Araport; AT4G23496; -.
DR TAIR; locus:505006517; AT4G23496.
DR eggNOG; ENOG502S5PX; Eukaryota.
DR HOGENOM; CLU_129558_1_0_1; -.
DR InParanoid; Q8LGD1; -.
DR OMA; DNEIPKT; -.
DR OrthoDB; 1603921at2759; -.
DR PhylomeDB; Q8LGD1; -.
DR PRO; PR:Q8LGD1; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q8LGD1; baseline and differential.
DR Genevisible; Q8LGD1; AT.
DR GO; GO:0010005; C:cortical microtubule, transverse to long axis; IBA:GO_Central.
DR GO; GO:0043622; P:cortical microtubule organization; IBA:GO_Central.
DR InterPro; IPR039613; SPR1/2/3/4/5.
DR PANTHER; PTHR33403; PTHR33403; 1.
PE 2: Evidence at transcript level;
KW Microtubule; Phosphoprotein; Reference proteome.
FT CHAIN 1..99
FT /note="Protein SPIRAL1-like 5"
FT /id="PRO_0000417957"
FT REGION 1..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 56..79
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 58
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9S7P8"
SQ SEQUENCE 99 AA; 10371 MW; 55CF5A968DB5C1A8 CRC64;
MSRGGSFGGG QSSLGYLFGS DNEIPKTPAP PVAPKPAPPY GVDSTEEDHE ADQKPKISNN
NYQRVQGQNS GNFVTDRPTT KVKSVPGGGS SLGYLFGDK
