SP20H_RAT
ID SP20H_RAT Reviewed; 530 AA.
AC Q66HC7;
DT 19-JUL-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Transcription factor SPT20 homolog;
GN Name=Supt20h; Synonyms=Fam48a, Supt20;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Required for MAP kinase p38 (MAPK11, MAPK12, MAPK13 and/or
CC MAPK14) activation during gastrulation. Required for down-regulation of
CC E-cadherin during gastrulation by regulating E-cadherin protein level
CC downstream from NCK-interacting kinase (NIK) and independently of the
CC regulation of transcription by FGF signaling and Snail. Required for
CC starvation-induced ATG9A trafficking during autophagy (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Interacts with ATG9A. Interacts with MAPK14 (By similarity).
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SPT20 family. {ECO:0000305}.
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DR EMBL; BC081923; AAH81923.1; -; mRNA.
DR RefSeq; NP_001014192.1; NM_001014170.1.
DR AlphaFoldDB; Q66HC7; -.
DR SMR; Q66HC7; -.
DR STRING; 10116.ENSRNOP00000054835; -.
DR PaxDb; Q66HC7; -.
DR GeneID; 361946; -.
DR KEGG; rno:361946; -.
DR UCSC; RGD:1307812; rat.
DR CTD; 55578; -.
DR RGD; 1307812; Supt20h.
DR eggNOG; ENOG502QS30; Eukaryota.
DR InParanoid; Q66HC7; -.
DR OrthoDB; 369747at2759; -.
DR PhylomeDB; Q66HC7; -.
DR PRO; PR:Q66HC7; -.
DR Proteomes; UP000002494; Unplaced.
DR GO; GO:0000124; C:SAGA complex; IBA:GO_Central.
DR GO; GO:0070461; C:SAGA-type complex; ISO:RGD.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0007369; P:gastrulation; IEA:UniProtKB-KW.
DR GO; GO:0035521; P:monoubiquitinated histone deubiquitination; ISO:RGD.
DR GO; GO:0035522; P:monoubiquitinated histone H2A deubiquitination; ISO:RGD.
DR GO; GO:0045722; P:positive regulation of gluconeogenesis; ISO:RGD.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISO:RGD.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR021950; Spt20.
DR PANTHER; PTHR13526; PTHR13526; 1.
DR Pfam; PF12090; Spt20; 2.
PE 2: Evidence at transcript level;
KW Developmental protein; Gastrulation; Phosphoprotein; Reference proteome.
FT CHAIN 1..530
FT /note="Transcription factor SPT20 homolog"
FT /id="PRO_0000187042"
FT REGION 419..530
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 419..451
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 464..486
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 499..530
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 296
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q7TT00"
FT MOD_RES 490
FT /note="Phosphothreonine"
FT /evidence="ECO:0000250|UniProtKB:Q8NEM7"
FT MOD_RES 515
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q8NEM7"
FT MOD_RES 520
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q7TT00"
SQ SEQUENCE 530 AA; 59513 MW; 915393E5E0EE5072 CRC64;
MQQALEQALD RAEYIVESAQ QRPPKRKCLS SGRKSIFQKL YDLYVEECEK EPEVKKLRRN
VNLLEKLVMQ ETLSCLVVNL YPGNEGYSLM LRGKNGSDSE TIRLPYEEGE LLEYLDAEEL
PPILVDLLEK SQVNIFHCGC VIAEIRDYRQ SSNMKSPGYQ SRHILLRPTM QTLVCDVHSI
TSDNHKWTQE DKLLLESQLI LATAEPLCLD PSVAVACTAN RLLYNRQKMN TRPMKRCLKR
YSRSSLNRQQ DLSHCPPPPQ LRLLDFLQKR KERKAGQHYD LKISKAGNCV DMWKRSPCNL
AVPSEVDVEK YAKVEKSIKS DDSQPTMWPA HDVKDDYVFE CEGGNQYQKT KLTILQSLGD
PLYYGKIQPW KADEESDSQM SPSHSSADDH SNWFIIGSKT DAERVVNQYQ ELVQNEAKCP
VKMSHSSSGS ASLNSGEEGE PETSSIQSSV LGKGVKHRPP PIKLPSSSGN SSSGNYFTAQ
QASSFLKSPT PPPPSSKPSL SRKSSVDLSQ VSMLSPAALS PASSSQRHES